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scnpilot_solids2_trim150_scaffold_930

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_930_1
unknown

Not on your lists

comp(3..101)
DNA (99bp) protein (33aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_930_2
unknown

Not on your lists

265..378
DNA (114bp) protein (38aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_930_3
Knoellia aerolata, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

600..1859
DNA (1260bp) protein (420aa)
Putative histidine kinase n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6X1K8_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KGN41136.1}; TaxID=1385519 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia aerolata DSM 18566.;"
scnpilot_solids2_trim150_scaffold_930_4
Kineosphaera limosa, Kineosphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1856..2536
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Actinomadura atramentaria RepID=UPI0003645271
Putative two-component response regulator {ECO:0000313|EMBL:GAB98246.1}; TaxID=1184609 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Kineosphaera.;" source="Kineosphaera limosa NBRC 100340.;"
LuxR family two component transcriptional regulator
scnpilot_solids2_trim150_scaffold_930_5
unknown

Not on your lists

2893..3084
DNA (192bp) protein (64aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_930_6
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3288..4688
DNA (1401bp) protein (467aa)
Uncharacterized protein n=1 Tax=Mycobacterium smegmatis JS623 RepID=L0ITG2_MYCSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB22158.1}; TaxID=710686 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis JS623.;"
scnpilot_solids2_trim150_scaffold_930_7
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4688..5950
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Capnocytophaga ochracea (strain ATCC 27872 / DSM 7271 / JCM 12966 / VPI 2845) RepID=C7M6K7_CAPOD
Uncharacterized protein {ECO:0000313|EMBL:KHK99433.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_930_8
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6296..6637
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Leifsonia xyli subsp. xyli (strain CTCB07) RepID=Q6ACH6_LEIXX
Uncharacterized protein {ECO:0000313|EMBL:KJL24871.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_930_9
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6796..7296
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Streptomyces sp. Amel2xE9 RepID=UPI00036970F1
Uncharacterized protein {ECO:0000313|EMBL:EXJ50910.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
scnpilot_solids2_trim150_scaffold_930_10
GWC2_TM7_48_9, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(7407..7976)
DNA (570bp) protein (190aa)
fimbrial protein pilin id=4339203 bin=GWC2_TM7_48_9 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
Fimbrial protein pilin {ECO:0000313|EMBL:KKW02585.1}; TaxID=1619071 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium GW2011_GWC2_48_9.;"
exported protein of unknown function
scnpilot_solids2_trim150_scaffold_930_11

Not on your lists

comp(8160..8690)
DNA (531bp) protein (177aa)
Uncharacterized protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T0YJV7_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD35721.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_930_12
[Haemophilus] parasuis, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8842..9420)
DNA (579bp) protein (193aa)
Intrrupted gp229, phage associated n=1 Tax=Haemophilus parasuis serovar 5 (strain SH0165) RepID=B8F4I3_HAEPS
intrrupted gp229, phage associated
Intrrupted gp229, phage associated {ECO:0000313|EMBL:ACL32235.1}; TaxID=557723 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus parasuis serovar 5 (strain SH0165).;"
scnpilot_solids2_trim150_scaffold_930_13
unknown

Not on your lists

comp(9605..9796)
DNA (192bp) protein (64aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_930_14

Not on your lists

comp(9972..10373)
DNA (402bp) protein (134aa)
Uncharacterized protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T0YJV7_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD35721.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
intrrupted gp229, phage associated protein
scnpilot_solids2_trim150_scaffold_930_15
unknown

Not on your lists

comp(10572..10973)
DNA (402bp) protein (134aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_930_16
Hafnia alvei, Hafnia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11129..11767)
DNA (639bp) protein (213aa)
Uncharacterized protein {ECO:0000313|EMBL:AIU74890.1}; TaxID=1453496 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Hafnia.;" source="Hafnia alvei FB1.;"
Putative uncharacterized protein id=3399105 bin=GWB1_Spirochaetes_59_5 species=Actinobacillus pleuropneumoniae genus=Actinobacillus taxon_order=Pasteurellales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB1_Spirochaetes_59_5 organism_group=Spirochaetes
hypothetical protein
scnpilot_solids2_trim150_scaffold_930_17

Not on your lists

comp(12002..13570)
DNA (1569bp) protein (523aa)
hypothetical protein n=1 Tax=Vibrio campbellii RepID=UPI00026C49BD
Uncharacterized protein {ECO:0000313|EMBL:KKN89284.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_930_18
Gordonia sp. no. 9, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13960..14844)
DNA (885bp) protein (295aa)
Putative uncharacterized protein n=3 Tax=Actinomyces sp. oral taxon 849 str. F0330 RepID=G9PKB1_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:KJQ99587.1}; TaxID=1617449 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia sp. no. 9.;"
integrase catalytic subunit rbh
scnpilot_solids2_trim150_scaffold_930_19
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14841..15083)
DNA (243bp) protein (81aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI000373FD22
Transposase {ECO:0000313|EMBL:KJE19635.1}; TaxID=1502723 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
transposase IS3/IS911 family protein
scnpilot_solids2_trim150_scaffold_930_20
GWC2_TM7_44_17_curated, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(15071..15721)
DNA (651bp) protein (217aa)
Fimbrial protein P9-2 id=2441431 bin=GWC2_TM7_44_17 species=Corynebacterium callunae genus=Corynebacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
putative Fimbral protein
Tax=GWC2_TM7_44_17_curated
scnpilot_solids2_trim150_scaffold_930_21
GWC2_TM7_48_9, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(15917..16495)
DNA (579bp) protein (193aa)
general secretion pathway protein H id=3133628 bin=GWC2_TM7_48_9 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
General secretion pathway protein H {ECO:0000313|EMBL:KKW03638.1}; TaxID=1619071 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium GW2011_GWC2_48_9.;"
exported protein of unknown function
scnpilot_solids2_trim150_scaffold_930_22
unknown

Not on your lists

comp(16750..18786)
DNA (2037bp) protein (679aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_930_23
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19023..19793
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Streptomyces scabies (strain 87.22) RepID=C9Z8I0_STRSW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBG70007.1}; TaxID=680198 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabies (strain 87.22) (Streptomyces scabiei).;"
scnpilot_solids2_trim150_scaffold_930_24
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19811..20962
DNA (1152bp) protein (384aa)
Putative membrane protein n=1 Tax=Streptomyces scabies (strain 87.22) RepID=C9Z8H9_STRSW
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CBG70006.1}; TaxID=680198 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabies (strain 87.22) (Streptomyces scabiei).;"
scnpilot_solids2_trim150_scaffold_930_25
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20959..21822
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Streptomyces scabies (strain 87.22) RepID=C9Z8H8_STRSW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBG70005.1}; TaxID=680198 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabies (strain 87.22) (Streptomyces scabiei).;"
scnpilot_solids2_trim150_scaffold_930_26
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22102..22713
DNA (612bp) protein (204aa)
Putative methyltransferase n=1 Tax=Streptomyces scabies (strain 87.22) RepID=C9Z8H7_STRSW rbh
methyltransferase rbh
Putative methyltransferase {ECO:0000313|EMBL:CBG70004.1}; TaxID=680198 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabies (strain 87.22) (Streptomyces scabiei).;"
scnpilot_solids2_trim150_scaffold_930_27
unknown

Not on your lists

22717..22929
DNA (213bp) protein (71aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_930_28
unknown

Not on your lists

22956..23270
DNA (315bp) protein (105aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_930_29
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23271..25463
DNA (2193bp) protein (731aa)
Uncharacterized protein n=1 Tax=Streptomyces scabies (strain 87.22) RepID=C9Z8H6_STRSW rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CBG70003.1}; TaxID=680198 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabies (strain 87.22) (Streptomyces scabiei).;"
scnpilot_solids2_trim150_scaffold_930_30
unknown

Not on your lists

25460..25657
DNA (198bp) protein (66aa)

This feature has no annotations

Displaying items 1-30 of 39 in total

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