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scnpilot_solids2_trim150_scaffold_934

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_934_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1..2019)
DNA (2019bp) protein (673aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000364EE00
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01889.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_934_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2102..2743
DNA (642bp) protein (214aa)
Beta-lactamase domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL47_NIAKG
beta-lactamase
Beta-lactamase domain protein {ECO:0000313|EMBL:AEW01888.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_934_3
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2785..4503)
DNA (1719bp) protein (573aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035D3203 rbh
Uncharacterized protein {ECO:0000313|EMBL:AHF17195.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
membrane-bound dehydrogenase
scnpilot_solids2_trim150_scaffold_934_4
unknown

Not on your lists

4565..4747
DNA (183bp) protein (61aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_934_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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comp(4787..5191)
DNA (405bp) protein (135aa)
methylmalonyl-CoA epimerase; K05606 methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
Methylmalonyl-CoA epimerase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJX1_NIAKG
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_934_6
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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5570..7459
DNA (1890bp) protein (630aa)
Peptidase S15 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PC58_CHIPD rbh
peptidase S15; K06978 rbh
Peptidase S15 {ECO:0000313|EMBL:ACU59441.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_934_7
unknown

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comp(7437..7562)
DNA (126bp) protein (42aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_934_8
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(7587..7793)
DNA (207bp) protein (69aa)
Putative uncharacterized protein id=3762947 bin=GWF2_Bacteroidetes_35_48 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
Tax=GWA2_Bacteroidetes_31_9_curated
scnpilot_solids2_trim150_scaffold_934_9
unknown

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comp(8068..8583)
DNA (516bp) protein (172aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_934_10
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(8795..9223)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QIS7_SPILD
Uncharacterized protein {ECO:0000313|EMBL:KJS04016.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_934_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9464..10549)
DNA (1086bp) protein (362aa)
hypothetical protein; K09001 anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000374AB8D rbh
Uncharacterized protein {ECO:0000313|EMBL:AEW03230.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_934_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10648..11298
DNA (651bp) protein (217aa)
uracil phosphoribosyltransferase; K00761 uracil phosphoribosyltransferase [EC:2.4.2.9]
Uracil phosphoribosyltransferase {ECO:0000313|EMBL:AEW03229.1}; EC=2.4.2.9 {ECO:0000313|EMBL:AEW03229.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Uracil phosphoribosyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQI2_NIAKG
scnpilot_solids2_trim150_scaffold_934_13
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

11402..12409
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037C371F
hypothetical protein rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_934_trna_1
unknown

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12498..12569
DNA (72bp)
transferRNA Glu
scnpilot_solids2_trim150_scaffold_934_14
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12999..14636
DNA (1638bp) protein (546aa)
Type I phosphodiesterase/nucleotide pyrophosphatase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PIN3_CHIPD rbh
type I phosphodiesterase/nucleotide pyrophosphatase rbh
Type I phosphodiesterase/nucleotide pyrophosphatase {ECO:0000313|EMBL:ACU58222.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_934_15
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14669..15349)
DNA (681bp) protein (227aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; K00991 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Niabella aurantiaca RepID=UPI000380360C
scnpilot_solids2_trim150_scaffold_934_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15693..16409)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIG1_NIAKG
putative protein-translocating porin PorT
Uncharacterized protein {ECO:0000313|EMBL:AEW01777.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_934_17
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(16382..17125)
DNA (744bp) protein (248aa)
demethylmenaquinone methyltransferase; K03183 ubiquinone/menaquinone biosynthesis methyltransferase [EC:2.1.1.163 2.1.1.201]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036B76F8 rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_934_18
unknown

Not on your lists

17284..17907
DNA (624bp) protein (208aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_934_19
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18238..19962)
DNA (1725bp) protein (575aa)
Amino acid permease-associated region n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y2Y7_9SPHI rbh
Amino acid permease-associated region {ECO:0000313|EMBL:EHQ28532.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_934_20
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20215..21195
DNA (981bp) protein (327aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339, ECO:0000256|SAAS:SAAS00197180};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
6-phosphofructokinase; K00850 6-phosphofructokinase [EC:2.7.1.11]
6-phosphofructokinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGD7_NIAKG
scnpilot_solids2_trim150_scaffold_934_21
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21261..22754
DNA (1494bp) protein (498aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
pyruvate kinase; K00873 pyruvate kinase [EC:2.7.1.40]
Pyruvate kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGD6_NIAKG
Displaying 22 items

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