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scnpilot_solids2_trim150_scaffold_936

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_936_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..616
DNA (615bp) protein (205aa)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104188};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00564}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
RNAse PH (EC:2.7.7.56)
Ribonuclease PH n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2C1_9GAMM
scnpilot_solids2_trim150_scaffold_936_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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715..1317
DNA (603bp) protein (201aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae
Non-canonical purine NTP pyrophosphatase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2C2_9GAMM rbh
non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family rbh
scnpilot_solids2_trim150_scaffold_936_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1314..2480
DNA (1167bp) protein (389aa)
HemN family oxidoreductase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2C3_9GAMM rbh
HemN family oxidoreductase {ECO:0000313|EMBL:EIL93614.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative oxygen-independent coproporphyrinogen III oxidase
scnpilot_solids2_trim150_scaffold_936_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2588..3163
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2C4_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL93615.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
FHA domain-containing protein
scnpilot_solids2_trim150_scaffold_936_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3174..4883
DNA (1710bp) protein (570aa)
Putative serine/threonine protein kinase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2C5_9GAMM rbh
Putative serine/threonine protein kinase {ECO:0000313|EMBL:EIL93616.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
serine/threonine protein kinase
scnpilot_solids2_trim150_scaffold_936_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4931..5818)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2C6_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL93617.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_936_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6145..8517
DNA (2373bp) protein (791aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2C7_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL93618.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Protein of unknown function (DUF1631)
scnpilot_solids2_trim150_scaffold_936_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8514..8861
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2C8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93619.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
PilZ domain-containing protein
scnpilot_solids2_trim150_scaffold_936_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8995..10311
DNA (1317bp) protein (439aa)
Xaa-Pro dipeptidase {ECO:0000256|HAMAP-Rule:MF_01279, ECO:0000256|SAAS:SAAS00016582}; Short=X-Pro dipeptidase {ECO:0000256|HAMAP-Rule:MF_01279};; EC=3.4.13.9 {ECO:0000256|HAMAP-Rule:MF_01279, ECO:0000256|SAAS:SAAS00016582};; Imidodipeptidase {ECO:0000256|HAMAP-Rule:MF_01279}; Proline dipeptidase {ECO:0000256|HAMAP-Rule:MF_01279}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Xaa-Pro dipeptidase (EC:3.4.13.9)
Xaa-Pro dipeptidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1T4_9GAMM rbh
scnpilot_solids2_trim150_scaffold_936_10
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10394..10624
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1T5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93426.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_936_11
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10621..12198
DNA (1578bp) protein (526aa)
cytochrome bd-type quinol oxidase, subunit 1 (EC:1.10.3.-) rbh
Cytochrome bd-I oxidase subunit I n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1T6_9GAMM rbh
Cytochrome bd-I oxidase subunit I {ECO:0000313|EMBL:EIL93427.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids2_trim150_scaffold_936_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12316..13446
DNA (1131bp) protein (377aa)
cytochrome d oxidase cyd, subunit II (EC:1.10.3.-)
Cytochrome d ubiquinol oxidase subunit II n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1T7_9GAMM rbh
Cytochrome d ubiquinol oxidase subunit II {ECO:0000313|EMBL:EIL93428.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids2_trim150_scaffold_936_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13462..13602
DNA (141bp) protein (47aa)
Protein ybgT n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1T8_9GAMM
Protein ybgT {ECO:0000313|EMBL:EIL93429.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
cyd operon protein YbgT
scnpilot_solids2_trim150_scaffold_936_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13763..15028)
DNA (1266bp) protein (422aa)
aminopeptidase P (EC:3.4.11.9)
Aminopeptidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1T9_9GAMM rbh
Aminopeptidase {ECO:0000313|EMBL:EIL93430.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids2_trim150_scaffold_936_15
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15100..15663)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1U0_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL93431.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_936_16
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15774..16013
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1U1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93432.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
TIGR02449 family protein
scnpilot_solids2_trim150_scaffold_936_17
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16013..16327
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1U2_9GAMM
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_936_18
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16648..17268
DNA (621bp) protein (207aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1U3_9GAMM rbh
5,10-methenyltetrahydrofolate synthetase
scnpilot_solids2_trim150_scaffold_936_19
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17265..17717
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1U4_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL93435.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_936_20
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17752..18393
DNA (642bp) protein (214aa)
Ribose-5-phosphate isomerase A {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00020824}; EC=5.3.1.6 {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00087684};; Phosphoriboisomerase A {ECO:0000256|HAMAP-Rule:MF_00170}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ribose-5-phosphate isomerase (EC:5.3.1.6) rbh
Ribose-5-phosphate isomerase A n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1U5_9GAMM rbh
scnpilot_solids2_trim150_scaffold_936_21
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18456..20354)
DNA (1899bp) protein (633aa)
Chloride channel n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1U6_9GAMM rbh
Chloride channel {ECO:0000313|EMBL:EIL93437.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
chloride channel protein EriC
scnpilot_solids2_trim150_scaffold_936_trna_1
unknown

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comp(20541..20611)
DNA (71bp)
transferRNA Gln
scnpilot_solids2_trim150_scaffold_936_22
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(20624..21016)
DNA (393bp) protein (131aa)
30S ribosomal protein S9 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1U7_9GAMM
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
ribosomal protein S9
scnpilot_solids2_trim150_scaffold_936_23
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(21026..21454)
DNA (429bp) protein (143aa)
50S ribosomal protein L13 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1U8_9GAMM
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
LSU ribosomal protein L13P
scnpilot_solids2_trim150_scaffold_936_24
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21745..22386
DNA (642bp) protein (214aa)
2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase {ECO:0000256|HAMAP-Rule:MF_01658, ECO:0000256|SAAS:SAAS00010155}; EC=1.14.13.- {ECO:0000256|HAMAP-Rule:MF_01658, ECO:0000256|SAAS:SAAS00231964};; 5-demethoxyubiquinone hydroxylase {ECO:0000256|HAMAP-Rule:MF_01658}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1U9_9GAMM rbh
ubiquinone biosynthesis protein COQ7
scnpilot_solids2_trim150_scaffold_936_25
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22481..22777)
DNA (297bp) protein (99aa)
S-adenosylmethionine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00465, ECO:0000256|SAAS:SAAS00039304}; Short=AdoMetDC {ECO:0000256|HAMAP-Rule:MF_00465};; Short=SAMDC {ECO:0000256|HAMAP-Rule:MF_00465};; EC=4.1.1.50 {ECO:0000256|HAMAP-Rule:MF_00465, ECO:0000256|SAAS:SAAS00093036};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
S-adenosylmethionine decarboxylase proenzyme (EC:4.1.1.50)
S-adenosylmethionine decarboxylase proenzyme n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1V0_9GAMM
Displaying 26 items

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