ggKbase home page

scnpilot_solids2_trim150_scaffold_971

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_971_1
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..944)
DNA (942bp) protein (314aa)
amidohydrolase; K01451 hippurate hydrolase [EC:3.5.1.32]
Amidohydrolase n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM2304) RepID=B5ZSX6_RHILW
Amidohydrolase {ECO:0000313|EMBL:AHK46099.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
scnpilot_solids2_trim150_scaffold_971_2
Advenella mimigardefordensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(937..2142)
DNA (1206bp) protein (402aa)
dpaL; diaminopropionate ammonia-lyase (EC:4.3.1.15) rbh
hypothetical protein n=1 Tax=Cupriavidus sp. BIS7 RepID=UPI0002DD99D8
Putative diaminopropionate ammonia-lyase {ECO:0000313|EMBL:AHG65211.1}; TaxID=1247726 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella mimigardefordensis DPN7.;"
scnpilot_solids2_trim150_scaffold_971_3
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2198..3451)
DNA (1254bp) protein (418aa)
hydantoinase/carbamoylase family amidase (EC:3.5.1.87); K06016 N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.87] rbh
allantoate amidohydrolase n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=UPI00035C51DE rbh
Allantoate amidohydrolase {ECO:0000313|EMBL:KJA11820.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
scnpilot_solids2_trim150_scaffold_971_4
Advenella mimigardefordensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3570..4043
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Cupriavidus sp. BIS7 RepID=UPI0002F82558
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:AHG65212.1}; TaxID=1247726 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella mimigardefordensis DPN7.;"
AsnC family transcriptional regulator
scnpilot_solids2_trim150_scaffold_971_5
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4201..4686
DNA (486bp) protein (162aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Cytosine/adenosine deaminase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VTC3_9GAMM
cytosine/adenosine deaminase
scnpilot_solids2_trim150_scaffold_971_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

4816..6057
DNA (1242bp) protein (414aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000287D77C rbh
Peptidase M28 {ECO:0000313|EMBL:AHG92473.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_971_7
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6197..6808)
DNA (612bp) protein (204aa)
Putative divalent heavy-metal cations transporter n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L0L1_FRAAD
Uncharacterized protein {ECO:0000313|EMBL:KGI79023.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
putative divalent heavy-metal cations transporter
scnpilot_solids2_trim150_scaffold_971_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7049..9061)
DNA (2013bp) protein (671aa)
Outer membrane hemin receptor n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCR1_9GAMM rbh
Outer membrane hemin receptor {ECO:0000313|EMBL:EIL97252.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
phuR; outer membrane hemin receptor; K02014 iron complex outermembrane recepter protein rbh
scnpilot_solids2_trim150_scaffold_971_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9325..9834
DNA (510bp) protein (170aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW58_9GAMM
peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family
scnpilot_solids2_trim150_scaffold_971_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9925..11124
DNA (1200bp) protein (400aa)
Aspartate aminotransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIW2_9GAMM
Aspartate aminotransferase {ECO:0000313|EMBL:EIL99403.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
aspartate/tyrosine/aromatic aminotransferase
scnpilot_solids2_trim150_scaffold_971_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11248..12234
DNA (987bp) protein (329aa)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|SAAS:SAAS00060476}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_01517, ECO:0000256|SAAS:SAAS00060476};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Malate dehydrogenase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIW1_9GAMM
malate dehydrogenase
scnpilot_solids2_trim150_scaffold_971_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12339..13943)
DNA (1605bp) protein (535aa)
Alkyl hydroperoxide reductase, F subunit n=1 Tax=Rhodanobacter denitrificans RepID=M4NLR8_9GAMM
alkyl hydroperoxide reductase, F subunit
Alkyl hydroperoxide reductase, F subunit {ECO:0000313|EMBL:AGG88686.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_971_13
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14065..14628)
DNA (564bp) protein (188aa)
ahpC; alkyl hydroperoxide reductase subunit C (EC:1.11.1.15); K03386 peroxiredoxin (alkyl hydroperoxide reductase subunit C) [EC:1.11.1.15]
Peroxiredoxin n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VMG4_9GAMM
Peroxiredoxin {ECO:0000313|EMBL:EIL88405.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
scnpilot_solids2_trim150_scaffold_971_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14787..16106)
DNA (1320bp) protein (440aa)
Na+/H+ dicarboxylate symporter n=1 Tax=Rhodanobacter denitrificans RepID=M4NGB1_9GAMM
Na+/H+ dicarboxylate symporter
Na+/H+ dicarboxylate symporter {ECO:0000313|EMBL:AGG88688.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_971_15
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16280..17170
DNA (891bp) protein (297aa)
prpB; 2-methylisocitrate lyase (EC:4.1.3.32); K03417 methylisocitrate lyase [EC:4.1.3.30]
2-methylisocitrate lyase n=1 Tax=Burkholderia sp. TJI49 RepID=F0FYK1_9BURK
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
scnpilot_solids2_trim150_scaffold_971_16
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17231..18382
DNA (1152bp) protein (384aa)
Citrate synthase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIV5_9GAMM
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
2-methylcitrate synthase/citrate synthase II
scnpilot_solids2_trim150_scaffold_971_17
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18455..19066)
DNA (612bp) protein (204aa)
Glutathione S-transferase {ECO:0000313|EMBL:KDD53291.1}; EC=2.5.1.18 {ECO:0000313|EMBL:KDD53291.1};; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica OSU553.;"
Glutathione S-transferase n=3 Tax=Bordetella bronchiseptica RepID=K0MW25_BORBM
gst; glutathione S-transferase
scnpilot_solids2_trim150_scaffold_971_18
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19212..19910)
DNA (699bp) protein (233aa)
Membrane protein TerC n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VP94_9GAMM
Membrane protein TerC {ECO:0000313|EMBL:EIL89035.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
integral membrane protein, YjbE family
scnpilot_solids2_trim150_scaffold_971_19
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20190..21641
DNA (1452bp) protein (484aa)
2-methylcitrate dehydratase (EC:4.2.1.79)
2-methylcitrate dehydratase {ECO:0000313|EMBL:AGG88692.1}; EC=4.2.1.79 {ECO:0000313|EMBL:AGG88692.1};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
2-methylcitrate dehydratase n=1 Tax=Rhodanobacter denitrificans RepID=I4WV87_9GAMM
scnpilot_solids2_trim150_scaffold_971_20
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21981..22262
DNA (282bp) protein (94aa)
Outer membrane protein/peptidoglycan-associated (Lipo)protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIV2_9GAMM
outer membrane protein/peptidoglycan-associated (lipo)protein
Outer membrane protein/peptidoglycan-associated (Lipo)protein {ECO:0000313|EMBL:EIL99078.1}; Flags: Fragment;; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Displaying 20 items

View Taxonomy