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scnpilot_solids2_trim150_scaffold_985

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_985_1
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..665)
DNA (663bp) protein (221aa)
Aldehyde dehydrogenase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HP82_PARL1
aldehyde dehydrogenase
Aldehyde dehydrogenase {ECO:0000313|EMBL:ABS61715.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
scnpilot_solids2_trim150_scaffold_985_2
Pseudomonas alcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1350..2651
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Pseudomonas alcaligenes NBRC 14159 RepID=U2ZS32_PSEAC
Uncharacterized protein {ECO:0000313|EMBL:GAD64255.1}; TaxID=1215092 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alcaligenes NBRC 14159.;"
O-antigen and teichoic acid export protein
scnpilot_solids2_trim150_scaffold_985_3
R_OD1_Jorgensenbacteria_45_25b, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

comp(2656..3774)
DNA (1119bp) protein (373aa)
Glutamine--scyllo-inositol transaminase id=3137394 bin=GWC2_Elusimicrobia_64_44 species=Rhizobium leguminosarum genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good rbh
glutamine--scyllo-inositol transaminase rbh
Tax=RIFCSPLOWO2_01_FULL_OD1_Jorgensenbacteria_45_25b_curated
scnpilot_solids2_trim150_scaffold_985_4
unknown

Not on your lists

3899..5062
DNA (1164bp) protein (388aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_985_5
bacterium UASB270, Bacteria

Not on your lists

comp(5067..5657)
DNA (591bp) protein (197aa)
Methyltransferase type 11 {ECO:0000313|EMBL:GAK55727.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
hypothetical protein id=1250552 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
type 11 methyltransferase
scnpilot_solids2_trim150_scaffold_985_6
Methanoculleus marisnigri, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5660..6865)
DNA (1206bp) protein (402aa)
Glycosyl transferase, group 1 n=1 Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CRW7_METMJ
glycosyl transferase, group 1
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ABN56117.1}; TaxID=368407 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus.;" source="Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1).;"
scnpilot_solids2_trim150_scaffold_985_7
BJP_08E140C01_Desulfomicrobium_58_14, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6890..7984)
DNA (1095bp) protein (365aa)
GDP-mannose 4,6-dehydratase; K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47]
GDP-mannose 4,6-dehydratase n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B5W9_9DELT
Tax=BJP_08E140C01_Desulfomicrobium_58_14
scnpilot_solids2_trim150_scaffold_985_8
Geobacter soli, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8020..8445)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI00037A31DD
Uncharacterized protein {ECO:0000313|EMBL:KIE42505.1}; TaxID=1510391 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter soli.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_985_9
Congregibacter litoralis, Congregibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8821..9633)
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Congregibacter litoralis RepID=UPI00006B2F18
Methyltransferase, FkbM family {ECO:0000313|EMBL:EAQ98619.2}; TaxID=314285 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Congregibacter.;" source="Congregibacter litoralis KT71.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_985_10

Not on your lists

comp(9742..10986)
DNA (1245bp) protein (415aa)
Marine sediment metagenome DNA, contig: S03H2_L09070 {ECO:0000313|EMBL:GAH31453.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
scnpilot_solids2_trim150_scaffold_985_11
unknown

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comp(10990..12036)
DNA (1047bp) protein (349aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_985_12
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

12665..13495
DNA (831bp) protein (277aa)
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_985_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

13495..14523
DNA (1029bp) protein (343aa)
Putative dehydrogenase id=4892963 bin=GWC2_Methylomirabilis_70_16 species=Polaromonas sp. CF318 genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
oxidoreductase domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
scnpilot_solids2_trim150_scaffold_985_14
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14516..15223
DNA (708bp) protein (236aa)
acylneuraminate cytidylyltransferase; K00983 N-acylneuraminate cytidylyltransferase [EC:2.7.7.43]
CMP-N-acetylneuraminic acid synthetase n=1 Tax=Polaromonas sp. CF318 RepID=J2TJA5_9BURK
CMP-N-acetylneuraminic acid synthetase {ECO:0000313|EMBL:EJL78597.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
scnpilot_solids2_trim150_scaffold_985_15
Desulfovibrio desulfuricans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15220..16011
DNA (792bp) protein (264aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Desulfovibrio desulfuricans ND132 RepID=F0JH61_DESDE rbh
short-chain dehydrogenase/reductase SDR rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EGB14000.1}; TaxID=641491 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio desulfuricans ND132.;"
scnpilot_solids2_trim150_scaffold_985_16
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16026..17183)
DNA (1158bp) protein (386aa)
Predicted pyridoxal phosphate-dependent enzyme n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2WB93_MAGSA
pyridoxal phosphate-dependent enzyme
Predicted pyridoxal phosphate-dependent enzyme {ECO:0000313|EMBL:BAE48882.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
scnpilot_solids2_trim150_scaffold_985_17
Leptospira noguchii, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(17183..18187)
DNA (1005bp) protein (335aa)
NAD-dependent dehydratase n=1 Tax=filamentous cyanobacterium ESFC-1 RepID=UPI000374D3F6 rbh
NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family {ECO:0000313|EMBL:EMS85290.1}; TaxID=1193054 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira noguchii str. Cascata.;"
NAD-dependent epimerase/dehydratase rbh
scnpilot_solids2_trim150_scaffold_985_18
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18274..19332)
DNA (1059bp) protein (353aa)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI000374EEE4
Alcohol dehydrogenase {ECO:0000313|EMBL:KJC56276.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
mannose-1-phosphate guanyltransferase rbh
scnpilot_solids2_trim150_scaffold_985_19
Desulfovibrio aespoeensis, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19455..20093)
DNA (639bp) protein (213aa)
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family n=1 Tax=Desulfovibrio aespoeensis (strain ATCC 700646 / DSM 10631 / Aspo-2) RepID=E6VR74_DESAO
sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family {ECO:0000313|EMBL:ADU64158.1}; TaxID=643562 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio aespoeensis (strain ATCC 700646 / DSM 10631 / Aspo-2).;"
scnpilot_solids2_trim150_scaffold_985_20
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20090..21256)
DNA (1167bp) protein (389aa)
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:CCQ72688.1}; EC=5.1.3.14 {ECO:0000313|EMBL:CCQ72688.1};; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Methylobacterium extorquens (strain CM4 / NCIMB 13688) RepID=B7KYN6_METC4 rbh
UDP-N-acetylglucosamine 2-epimerase rbh
scnpilot_solids2_trim150_scaffold_985_21
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21253..22305)
DNA (1053bp) protein (351aa)
N-acetylneuraminate synthase; K01654 N-acetylneuraminate synthase [EC:2.5.1.56] rbh
N-acetylneuraminate synthase n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8P1M5_GRAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EWY42513.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
scnpilot_solids2_trim150_scaffold_985_trna_1
unknown

Not on your lists

comp(22401..22481)
DNA (81bp)
transferRNA Undet
scnpilot_solids2_trim150_scaffold_985_22
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22519..25056)
DNA (2538bp) protein (846aa)
hypothetical protein n=1 Tax=Nevskia ramosa RepID=UPI0003B585B2
Polysaccharide biosynthesis/export protein {ECO:0000313|EMBL:EFH12236.1}; Flags: Fragment;; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
kpsD; polysaccharide biosynthesis/export protein
Displaying 23 items

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