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scnpilot_solids2_trim150_scaffold_988

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_988_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..374)
DNA (372bp) protein (124aa)
molecular chaperone GrpE n=1 Tax=Thiobacillus denitrificans RepID=UPI000376A7CD
molecular chaperone protein GrpE; K03687 molecular chaperone GrpE
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_solids2_trim150_scaffold_988_trna_1
unknown

Not on your lists

527..614
DNA (88bp)
transferRNA Ser
scnpilot_solids2_trim150_scaffold_988_2
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(791..1648)
DNA (858bp) protein (286aa)
GTP cyclohydrolase n=1 Tax=Thiobacillus denitrificans RepID=UPI000361EDF5 rbh
GTP cyclohydrolase
Tax=CG_Hydro_01
scnpilot_solids2_trim150_scaffold_988_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1674..2222)
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037BAA13 rbh
electron transport protein SCO1/SenC; K07152
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids2_trim150_scaffold_988_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2527..4488
DNA (1962bp) protein (654aa)
chemotaxis protein CheY n=1 Tax=Thiobacillus denitrificans RepID=UPI000360A4E4 rbh
Fis family GAF modulated sigma54 specific transcriptional regulator
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids2_trim150_scaffold_988_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4490..4990
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035FFAE2 rbh
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids2_trim150_scaffold_988_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4983..5540
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003643FDB rbh
flavoprotein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids2_trim150_scaffold_988_7
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5516..6916
DNA (1401bp) protein (467aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003642329 rbh
Dihydropteroate synthase DHPS {ECO:0000313|EMBL:EIZ04439.1}; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. PBA.;"
dihydropteroate synthase DHPS rbh
scnpilot_solids2_trim150_scaffold_988_8
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6913..7482
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000365A732 rbh
Uncharacterized protein {ECO:0000313|EMBL:EGK73282.1}; TaxID=1000565 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Methyloversatilis.;" source="Methyloversatilis universalis (strain ATCC BAA-1314 / JCM 13912 /; FAM5).;"
hypothetical protein; K09154 hypothetical protein
scnpilot_solids2_trim150_scaffold_988_9
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7479..8174
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000361ADB7 rbh
Uncharacterized protein {ECO:0000313|EMBL:ESZ21563.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_988_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8324..9718)
DNA (1395bp) protein (465aa)
GTP-binding protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037CD4FF rbh
putative GTP-binding protein; K03665 GTP-binding protein HflX rbh
Tax=GWE1_Thiobacillus_62_9_curated
scnpilot_solids2_trim150_scaffold_988_11
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(9780..11135)
DNA (1356bp) protein (452aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036A5C9E rbh
PLP-dependent enzyme, glutamate decarboxylase rbh
PLP-dependent enzyme, glutamate decarboxylase {ECO:0000313|EMBL:AGA24650.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
scnpilot_solids2_trim150_scaffold_988_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11178..11768)
DNA (591bp) protein (197aa)
thioredoxin family protein id=12498415 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
thioredoxin family protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids2_trim150_scaffold_988_13
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11910..12542)
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000378BF1B rbh
aspartate/glutamate/uridylate kinase
Aspartate/glutamate/uridylate kinase {ECO:0000313|EMBL:ADE16896.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
scnpilot_solids2_trim150_scaffold_988_14
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12527..13948)
DNA (1422bp) protein (474aa)
pabB; para-aminobenzoate synthase, component I (EC:4.1.3.-); K01665 para-aminobenzoate synthetase component I [EC:2.6.1.85]
anthranilate synthase subunit I n=1 Tax=Thiobacillus denitrificans RepID=UPI00036A5FF3 rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids2_trim150_scaffold_988_15
Burkholderia sp. BT03, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13939..15003)
DNA (1065bp) protein (355aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003652285 rbh
H4MPT-linked C1 transfer pathway protein {ECO:0000313|EMBL:EUC17723.1}; TaxID=1144309 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. BT03.;"
H4MPT-linked C1 transfer pathway protein
scnpilot_solids2_trim150_scaffold_988_16
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14987..15961)
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037DECAE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAU91087.1}; TaxID=243233 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
scnpilot_solids2_trim150_scaffold_988_17
Methylobacterium radiotolerans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15999..16721
DNA (723bp) protein (241aa)
histidine biosynthesis protein; K01814 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003800977 rbh
Histidine biosynthesis protein {ECO:0000313|EMBL:ACB22974.1}; TaxID=426355 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM; 2831).;"
scnpilot_solids2_trim150_scaffold_988_18
Thiorhodococcus drewsii, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16630..17862)
DNA (1233bp) protein (411aa)
ptpS; 6-pyruvoyl-tetrahydropterin synthase; K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12]
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036F38AE rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EGV33362.1}; TaxID=765913 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococcus drewsii AZ1.;"
scnpilot_solids2_trim150_scaffold_988_19
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17876..18388)
DNA (513bp) protein (171aa)
formaldehyde-activating enzyme; K10713 formaldehyde-activating enzyme [EC:4.3.-.-] id=12498408 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
formaldehyde-activating enzyme; K10713 formaldehyde-activating enzyme [EC:4.3.-.-]
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_solids2_trim150_scaffold_988_20
Methylomicrobium kenyense, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18500..19414)
DNA (915bp) protein (305aa)
Triphosphoribosyl-dephospho-CoA synthase {ECO:0000256|SAAS:SAAS00100821}; EC=2.4.2.52 {ECO:0000256|SAAS:SAAS00100821};; TaxID=269709 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium kenyense.;"
hypothetical protein; K05966 triphosphoribosyl-dephospho-CoA synthase [EC:2.7.8.25]
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037B851E rbh
scnpilot_solids2_trim150_scaffold_988_21
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19411..20325)
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000361A70C rbh
Uncharacterized protein {ECO:0000313|EMBL:EGK72336.1}; TaxID=1000565 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Methyloversatilis.;" source="Methyloversatilis universalis (strain ATCC BAA-1314 / JCM 13912 /; FAM5).;"
rimK; RimK family alpha-L-glutamate ligase rbh
scnpilot_solids2_trim150_scaffold_988_22
Thiorhodococcus drewsii, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20322..21302)
DNA (981bp) protein (327aa)
Methenyltetrahydromethanopterin cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_00486}; EC=3.5.4.27 {ECO:0000256|HAMAP-Rule:MF_00486};; Methenyl-H4MPT cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_00486}; TaxID=765913 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococcus drewsii AZ1.;"
methenyltetrahydromethanopterin cyclohydrolase (EC:3.5.4.27); K01499 methenyltetrahydromethanopterin cyclohydrolase [EC:3.5.4.27]
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036EC557 rbh
scnpilot_solids2_trim150_scaffold_988_23
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21309..21734)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037FDC4D
conserved exported protein of unknown function
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Displaying 24 items

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