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scnpilot_solids2_trim150_scaffold_995

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_995_1
unknown

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3..95
DNA (93bp) protein (31aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_995_2
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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99..995
DNA (897bp) protein (299aa)
myo-inositol catabolism protein IolH n=1 Tax=Segetibacter koreensis RepID=UPI0003656B9A rbh
xylose isomerase domain-containing protein rbh
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:AEL27752.1}; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus; marinus).;"
scnpilot_solids2_trim150_scaffold_995_3
Cecembia lonarensis, Cecembia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

1276..2148
DNA (873bp) protein (291aa)
Gluconolactonase n=1 Tax=Cecembia lonarensis LW9 RepID=K1L132_9BACT rbh
Gluconolactonase {ECO:0000313|EMBL:EKB50115.1}; TaxID=1225176 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cecembia.;" source="Cecembia lonarensis LW9.;"
SMP-30/gluconolaconase/LRE-like region-containing protein rbh
scnpilot_solids2_trim150_scaffold_995_4
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2347..3411
DNA (1065bp) protein (355aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
aldose 1-epimerase (EC:5.1.3.3); K01785 aldose 1-epimerase [EC:5.1.3.3]
Aldose 1-epimerase n=1 Tax=Pedobacter sp. BAL39 RepID=A6EH17_9SPHI
scnpilot_solids2_trim150_scaffold_995_5
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3532..3783
DNA (252bp) protein (84aa)
Tax=GWB2_Bacteroidetes_41_8_curated
scnpilot_solids2_trim150_scaffold_995_6
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3741..4091
DNA (351bp) protein (117aa)
Tax=GWA2_Bacteroidetes_30_7_curated
scnpilot_solids2_trim150_scaffold_995_7
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4175..5164
DNA (990bp) protein (330aa)
deoxyfructose oxidoreductase n=1 Tax=SAR324 cluster bacterium SCGC AAA240-J09 RepID=UPI0002F35C4B rbh
Oxidoreductase domain protein {ECO:0000313|EMBL:EHQ30514.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase rbh
scnpilot_solids2_trim150_scaffold_995_8
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5313..6071
DNA (759bp) protein (253aa)
Crp/Fnr family transcriptional regulator n=1 Tax=Cytophagales str. B6 RepID=UPI0003B37909 rbh
Uncharacterized protein {ECO:0000313|EMBL:ETZ21690.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
Crp/FNR family transcriptional regulator; K09992 hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_995_9
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

6129..8369
DNA (2241bp) protein (747aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037746A2 rbh
Cytochrome C {ECO:0000313|EMBL:AKD58070.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
cytochrome c class I rbh
scnpilot_solids2_trim150_scaffold_995_10
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8566..9252
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EAY9_9SPHI
Contig15, whole genome shotgun sequence {ECO:0000313|EMBL:KIO78380.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_995_11
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9253..10569
DNA (1317bp) protein (439aa)
Probable protein kinase n=1 Tax=Pedobacter sp. BAL39 RepID=A6EAZ0_9SPHI rbh
ABC transporter {ECO:0000313|EMBL:KIA93773.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
putative unusual protein kinase rbh
scnpilot_solids2_trim150_scaffold_995_12
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10664..10963)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0KXU5_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:CCH16392.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_995_13
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(11083..11643)
DNA (561bp) protein (187aa)
Putative uncharacterized protein n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11Q70_CYTH3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG60443.1}; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469).;"
scnpilot_solids2_trim150_scaffold_995_14
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11659..12039)
DNA (381bp) protein (127aa)
Transposase, IS1 family n=1 Tax=Flavobacterium sp. CF136 RepID=J3C5A3_9FLAO
Transposase {ECO:0000313|EMBL:KIA91797.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
IS1 transposase
scnpilot_solids2_trim150_scaffold_995_15
unknown

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comp(12048..12155)
DNA (108bp) protein (36aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_995_16
unknown

Not on your lists

comp(12582..13094)
DNA (513bp) protein (171aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_995_17
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13373..13897)
DNA (525bp) protein (175aa)
Transposase n=1 Tax=Niabella soli DSM 19437 RepID=H1NND0_9SPHI
Transposase {ECO:0000313|EMBL:AHF15307.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_995_18
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14079..15137)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TN03_NIAKG rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEV96665.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_995_19
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15443..16318)
DNA (876bp) protein (292aa)
membrane protein n=1 Tax=Pedobacter agri RepID=UPI00029A1EA1
Membrane protein {ECO:0000313|EMBL:KEQ31370.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
OmpA/MotB domain-containing protein; K02557 chemotaxis protein MotB
scnpilot_solids2_trim150_scaffold_995_20
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16594..18975
DNA (2382bp) protein (794aa)
40-residue YVTN family beta-propeller repeat protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIQ1_NIAKG rbh
40-residue YVTN family beta-propeller repeat-containing protein rbh
40-residue YVTN family beta-propeller repeat protein {ECO:0000313|EMBL:AEW02904.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_995_21
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19034..19837)
DNA (804bp) protein (268aa)
TrmH family RNA methyltransferase; K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003659ABC
RNA methyltransferase {ECO:0000313|EMBL:KIC95040.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
scnpilot_solids2_trim150_scaffold_995_22
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19895..20107)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C1F5_SPHS2
Uncharacterized protein {ECO:0000313|EMBL:KHJ36990.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_995_23
unknown

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comp(20125..20331)
DNA (207bp) protein (69aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_995_24
RBG_19FT_COMBO_Nitrospirae_42_15_curated, Nitrospirae, Bacteria

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20472..20750
DNA (279bp) protein (93aa)
Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated
scnpilot_solids2_trim150_scaffold_995_25
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20804..21598)
DNA (795bp) protein (265aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
metK; S-adenosylmethionine synthetase (EC:2.5.1.6); K00789 S-adenosylmethionine synthetase [EC:2.5.1.6]
MetK protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S4M2_9FLAO
Displaying 25 items

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