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scnpilot_solids2_trim150_scaffold_211_12

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: 9964..10518

Top 3 Functional Annotations

Value Algorithm Source
Sigma-24 n=3 Tax=Oligotropha carboxidovorans RepID=B6JKC4_OLICO similarity UNIREF
DB: UNIREF100
  • Identity: 94.0
  • Coverage: 184.0
  • Bit_score: 333
  • Evalue 1.50e-88
  • rbh
putative RNA polymerase sigma factor protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 94.0
  • Coverage: 184.0
  • Bit_score: 333
  • Evalue 4.80e-89
  • rbh
Putative RNA polymerase sigma factor protein {ECO:0000313|EMBL:AEI08239.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.0
  • Coverage: 184.0
  • Bit_score: 333
  • Evalue 2.10e-88

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Taxonomy

Oligotropha carboxidovorans → Oligotropha → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 555
ATGACAAAGGAGTCTGACCTCAAGGCCCTGATGGCGGCAAGTCTCGAAGGCGACTCGAGTGCACATCAATCACTGCTGACAGCTTTGAGCGGATACCTGAGAAGCTACTATAAGAGCAAGCTTGTGCGTGCTGGGCGCACTGCCGAGGAAGCCGAGGATCTCGTGCAGGAGGCCTTAATTGTCATCCACACGCAGCGTCATACCTACGACCAGGAGCAGCCGCTAACGCCGTGGGTGTATGCCATTGCACGCTACAAGCTTATCGATCATTTGCGGCGCACCCGGGCGTCGACGGCGAGTGTCCCTCTGGAAAACGCCGAAAATATTTTGGCATCCGACGACAGCGTCGCTACCGAAAGCCAGTTCGATCTTACCAGGCTCCTTGAAAGGCTGCCCGAAAGAATGCGACTTTCGATCCAATACGTGAAGCTCGACGGCATGAGCGTAGCCGAAGCAGCTCATCGTTGCGGAATATCGAAGTCCGCCGTCAAAGTTAATGTGCACCGTGGGCTGAAAATCCTTGCCGCTTCGATTGCACGGGAGACAAAAGCGTGA
PROTEIN sequence
Length: 185
MTKESDLKALMAASLEGDSSAHQSLLTALSGYLRSYYKSKLVRAGRTAEEAEDLVQEALIVIHTQRHTYDQEQPLTPWVYAIARYKLIDHLRRTRASTASVPLENAENILASDDSVATESQFDLTRLLERLPERMRLSIQYVKLDGMSVAEAAHRCGISKSAVKVNVHRGLKILAASIARETKA*