ggKbase home page

scnpilot_solids2_trim150_scaffold_268_12

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: comp(11068..12645)

Top 3 Functional Annotations

Value Algorithm Source
Rhomboid family protein n=1 Tax=Shewanella sp. (strain MR-4) RepID=Q0HM08_SHESM similarity UNIREF
DB: UNIREF100
  • Identity: 44.3
  • Coverage: 515.0
  • Bit_score: 460
  • Evalue 1.80e-126
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:KFF16639.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. JM1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.1
  • Coverage: 511.0
  • Bit_score: 617
  • Evalue 1.60e-173
rhomboid family protein similarity KEGG
DB: KEGG
  • Identity: 44.3
  • Coverage: 515.0
  • Bit_score: 460
  • Evalue 5.70e-127
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chryseobacterium sp. JM1 → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1578
ATGGATAACTTCGCAAAAAAACTGAAACTAATTTTTGTTCCATTCCTTGTCATTGCAATTTGCGTTATCGGCGGTTACACATTTTTAAATTGGCTTTTGTTCATTAAGCTGCACATTTTTTCTGTAAAAGAAAACATACTAAACTTGTGGATACCAATAGCTCTTCCCTGGATACCAATTCTTGTTTGGTTGCGACCAAGAATAAAACTGTTAAATCTTAAACGTAAAAAAGGCGACCTTCCGGGTCTTTTTATTTTCATCGCAGGTTTTGCAATTGCCATACCGACTCTTGTTGCGCAAACATATCTTCAAACAGCTTCGGGGAAACTCACACAACTTGATAACATCAATCAAATAGAAAAACAAGAAGCTACAAAATATTATGTGCTGAAGAATTTTTATATTGATAAATCACATATCGGCGTACAAAGCTCATTTGACGTTAGCGGTAAGCACAGCGAACATTTCAACATGAATTTGTATGTTGCATTACCAATTTTTTCTTCGCCAACTGACACATTAAATTCTACTTGCTTTGCATGGTATGGAGTAAAGTATCATAAACAAATCAGCAACAGACTTAATGAAAAAGAAAAGAAAGAACAGTTTCAGGAATTTGCAAAAGCAAGTCAGGCAGACTTTGAATCAAAAGATGTAAACCAATTTATTTACTTTGACAGAATTGGAAATACAGACGACCACAAAGGATATATTTCTGCAATCAAAAACGATAAAACATTTTCGAGTAATGCAACAACCGTTTTAGTTCCCGTAAATGAACCGTTTGAAAAACGCAATGGAAATAAACTTGCATGGATATTTGGAGCATTGGCAATCGGCGCTGCTGTTTGGTTGATTATGATTGCTATTCCAAAGTTTGATGAAAGTACGGCAGAAAAATTTGATAGTGGAACTATTGAAAAATCAACGGACACAAAAGAAGCATTGAAATTTTTTCTTCCAAGAGAAGGATTTTTCATTACGCCAATCATAATGGATTTAAATATTCTCATTTTTATTCTTATGGTTTTTGCAGGGCTTGGTTTTATTTCGTTCAGGGCTAATGATTTATTAGCCTGGGGAGCAAACTTCAGACCTGTTACAACAAATGGCGAATGGTGGCGACTTTTGACAAACACATTTTTGCATGGAGGATTGATACACTTGCTTGCAAATATGTACGGACTTTTATTCGTTGGAATTTTTCTTGAGCCACGCTTAGGAAAAATAAAATATGCTGCCGCTTATTTAACAACGGGCATTCTTGCAAGCATTGCAAGCTTGTGGTGGCACGAGGCAGCAGTAAGCGTAGGCGCTTCAGGCGCCATCTTTGGACTGTATGGAGTTTTTCTTGCATTGCTTGTAACAAAAGTTTTTTCGAAAGAGTTCAGCAAAGCGTTCATGACAAGCACTCTAATTTTTGTTGGGTACAATTTATTAATGGGGCTTTCAGGTGGCATTGACAATGCCGCACACATCGGTGGGCTAATAAGTGGTTTTATTATTGGACTTATCTATTCACCTCAACTCAAACGAGATGCAGAGTATGAGCAATTTGTTGAAGAAGCACAATTATAA
PROTEIN sequence
Length: 526
MDNFAKKLKLIFVPFLVIAICVIGGYTFLNWLLFIKLHIFSVKENILNLWIPIALPWIPILVWLRPRIKLLNLKRKKGDLPGLFIFIAGFAIAIPTLVAQTYLQTASGKLTQLDNINQIEKQEATKYYVLKNFYIDKSHIGVQSSFDVSGKHSEHFNMNLYVALPIFSSPTDTLNSTCFAWYGVKYHKQISNRLNEKEKKEQFQEFAKASQADFESKDVNQFIYFDRIGNTDDHKGYISAIKNDKTFSSNATTVLVPVNEPFEKRNGNKLAWIFGALAIGAAVWLIMIAIPKFDESTAEKFDSGTIEKSTDTKEALKFFLPREGFFITPIIMDLNILIFILMVFAGLGFISFRANDLLAWGANFRPVTTNGEWWRLLTNTFLHGGLIHLLANMYGLLFVGIFLEPRLGKIKYAAAYLTTGILASIASLWWHEAAVSVGASGAIFGLYGVFLALLVTKVFSKEFSKAFMTSTLIFVGYNLLMGLSGGIDNAAHIGGLISGFIIGLIYSPQLKRDAEYEQFVEEAQL*