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scnpilot_solids2_trim150_scaffold_268

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_268_1
Cyclobacteriaceae bacterium AK24, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

2..508
DNA (507bp) protein (169aa)
Putative NADH-dependent dehydrogenase n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZQ66_9BACT
Putative NADH-dependent dehydrogenase {ECO:0000313|EMBL:EON76271.1}; TaxID=1288963 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified Cyclobacteriaceae.;" source="Cyclobacteriaceae bacterium AK24.;"
oxidoreductase domain-containing protein
scnpilot_solids2_trim150_scaffold_268_2
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(596..1615)
DNA (1020bp) protein (340aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035CAA67
Large multifunctional protein-glycosyl hydrolase {ECO:0000313|EMBL:KIC96003.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_268_3
Synechococcus sp. PCC 6312, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

1745..2719
DNA (975bp) protein (325aa)
DNA modification methylase n=1 Tax=Synechococcus sp. (strain ATCC 27167 / PCC 6312) RepID=K9RSI8_SYNP3 rbh
DNA modification methylase rbh
DNA modification methylase {ECO:0000313|EMBL:AFY60062.1}; TaxID=195253 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (strain ATCC 27167 / PCC 6312).;"
scnpilot_solids2_trim150_scaffold_268_4
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2716..3519
DNA (804bp) protein (268aa)
Restriction endonuclease EcoRI n=1 Tax=Synechococcus sp. (strain ATCC 27167 / PCC 6312) RepID=K9RRF8_SYNP3 rbh
Restriction endonuclease EcoRI rbh
Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
scnpilot_solids2_trim150_scaffold_268_5
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3799..4248
DNA (450bp) protein (150aa)
Acetyltransferase (GNAT) family n=1 Tax=Formosa agariphila KMM 3901 RepID=T2KHV6_9FLAO
acetyltransferase
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
scnpilot_solids2_trim150_scaffold_268_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4642..5919
DNA (1278bp) protein (426aa)
NADH dehydrogenase (ubiquinone); K03885 NADH dehydrogenase [EC:1.6.99.3] rbh
NADH dehydrogenase (Ubiquinone) {ECO:0000313|EMBL:AEW02419.1}; EC=1.6.5.3 {ECO:0000313|EMBL:AEW02419.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
NADH dehydrogenase (Ubiquinone) n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TA47_NIAKG rbh
scnpilot_solids2_trim150_scaffold_268_7
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

5919..7337
DNA (1419bp) protein (473aa)
Methyltransferase type 12 n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IFM5_FLUTR rbh
type 12 methyltransferase rbh
Methyltransferase type 12 {ECO:0000313|EMBL:AEA45739.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
scnpilot_solids2_trim150_scaffold_268_8
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7411..8364
DNA (954bp) protein (318aa)
Zinc-containing alcohol dehydrogenase {ECO:0000313|EMBL:EOR95184.1}; EC=1.1.1.- {ECO:0000313|EMBL:EOR95184.1};; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
Zinc-containing alcohol dehydrogenase n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9H1X0_9SPHI rbh
alcohol dehydrogenase zinc-binding domain-containing protein rbh
scnpilot_solids2_trim150_scaffold_268_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8633..9745)
DNA (1113bp) protein (371aa)
Carboxylate-amine ligase ybdK; K06048 carboxylate-amine ligase [EC:6.3.-.-] rbh
Putative glutamate--cysteine ligase 2 {ECO:0000256|HAMAP-Rule:MF_01609}; EC=6.3.2.2 {ECO:0000256|HAMAP-Rule:MF_01609};; Gamma-glutamylcysteine synthetase 2 {ECO:0000256|HAMAP-Rule:MF_01609}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Carboxylate-amine ligase Niako_0394 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQQ8_NIAKG rbh
scnpilot_solids2_trim150_scaffold_268_10
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(9853..10806)
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NTN2_9SPHI
glutathione synthase/ribosomal protein S6 modification enzyme (glutaminyl transferase)-like protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_268_11
unknown

Not on your lists

10899..11051
DNA (153bp) protein (51aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_268_12
Chryseobacterium sp. JM1, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11068..12645)
DNA (1578bp) protein (526aa)
Rhomboid family protein n=1 Tax=Shewanella sp. (strain MR-4) RepID=Q0HM08_SHESM rbh
Uncharacterized protein {ECO:0000313|EMBL:KFF16639.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. JM1.;"
rhomboid family protein rbh
scnpilot_solids2_trim150_scaffold_268_13
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

13073..14128
DNA (1056bp) protein (352aa)
FG-GAP repeat-containing protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VSS5_DYAFD rbh
FG-GAP repeat-containing protein rbh
FG-GAP repeat-containing protein {ECO:0000313|EMBL:ACT92897.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
scnpilot_solids2_trim150_scaffold_268_14
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14215..16905
DNA (2691bp) protein (897aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000370DB70
Uncharacterized protein {ECO:0000313|EMBL:ETZ23768.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
heme-binding protein
scnpilot_solids2_trim150_scaffold_268_15
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

16950..18005
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QJ04_SPILD rbh
Uncharacterized protein {ECO:0000313|EMBL:AKD56590.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_268_16
Zobellia galactanivorans, Zobellia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18173..19390
DNA (1218bp) protein (406aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00038088F4
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CAZ97306.1}; TaxID=63186 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zobellia.;" source="Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871; / Dsij).;"
scnpilot_solids2_trim150_scaffold_268_17
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

19490..20533
DNA (1044bp) protein (348aa)
xylose isomerase n=1 Tax=Segetibacter koreensis RepID=UPI00037387BB rbh
Xylose isomerase {ECO:0000313|EMBL:AKD56588.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
xylose isomerase rbh
scnpilot_solids2_trim150_scaffold_268_18

Not on your lists

20623..21786
DNA (1164bp) protein (388aa)
oxidoreductase n=1 Tax=Flexithrix dorotheae RepID=UPI00037CCA2E
Uncharacterized protein {ECO:0000313|EMBL:KKO06174.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
oxidoreductase domain-containing protein
scnpilot_solids2_trim150_scaffold_268_19
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

22025..22828
DNA (804bp) protein (268aa)
glycosyl hydrolase n=1 Tax=Spirosoma panaciterrae RepID=UPI00036B5B3D
Glycosyl hydrolase {ECO:0000313|EMBL:AKD56591.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_268_20
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

22947..24005
DNA (1059bp) protein (353aa)
hypothetical protein n=1 Tax=Flavobacterium antarcticum RepID=UPI0003B4ECEA rbh
Uncharacterized protein {ECO:0000313|EMBL:AHM61355.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_268_21
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24075..25100)
DNA (1026bp) protein (342aa)
Regulatory protein GntR HTH n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPW7_NIAKG
regulatory protein GntR HTH
Regulatory protein GntR HTH {ECO:0000313|EMBL:AEV99961.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_268_22
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25332..25778)
DNA (447bp) protein (149aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZCN6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM22255.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
lipoprotein
scnpilot_solids2_trim150_scaffold_268_23
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25926..27137)
DNA (1212bp) protein (404aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
succinyl-CoA ligase subunit beta; K01903 succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQP4_NIAKG
scnpilot_solids2_trim150_scaffold_268_24
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27393..28205
DNA (813bp) protein (271aa)
purine nucleoside phosphorylase I; K03783 purine-nucleoside phosphorylase [EC:2.4.2.1]
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Purine nucleoside phosphorylase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQP5_NIAKG
scnpilot_solids2_trim150_scaffold_268_25
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

28218..30278
DNA (2061bp) protein (687aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000376E4B7
Uncharacterized protein {ECO:0000313|EMBL:KIC93599.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_268_26
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30409..30846)
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036FEB59
Uncharacterized protein {ECO:0000313|EMBL:KIC93876.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
heat shock protein Hsp20; K13993 HSP20 family protein
scnpilot_solids2_trim150_scaffold_268_27
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

31064..31477
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NPV2_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF14912.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_268_28
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

31583..32920
DNA (1338bp) protein (446aa)
Prolipoprotein diacylglyceryl transferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THT5_NIAKG
prolipoprotein diacylglyceryl transferase
Prolipoprotein diacylglyceryl transferase {ECO:0000313|EMBL:AEV98530.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_268_29
unknown

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comp(33396..33722)
DNA (327bp) protein (109aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_268_30
unknown

Not on your lists

34306..34512
DNA (207bp) protein (69aa)

This feature has no annotations

Displaying items 1-30 of 51 in total

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