ggKbase home page

scnpilot_solids2_trim150_scaffold_348_4

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: comp(5309..6046)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.4
  • Coverage: 234.0
  • Bit_score: 332
  • Evalue 4.90e-88
pseudouridine synthase family protein (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 68.7
  • Coverage: 230.0
  • Bit_score: 322
  • Evalue 1.10e-85
pseudouridine synthase n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003AAB721 similarity UNIREF
DB: UNIREF100
  • Identity: 67.5
  • Coverage: 234.0
  • Bit_score: 326
  • Evalue 1.90e-86

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lysobacter arseniciresistens → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 738
GTGAGGCTGGTGCGCCTGATCGCCAACCTCGGCTACGGCAGCCGCAAGGAAGTGGCGCAGATGTTCCGCGCCGGCCGTGTGACCGACACGGACGGCGAGGTGCTGTACGCCGACGACCAGGTGGAGGCGTCGTCGATCCGTGTCGATGGCGCGCCGCTCGACCCGGGCAGCGGGCTGGTCCTCATGTTGCACAAGCCGGTGGGCTATACCTGCTCGCACCGCGATCCAGGCCAGCTGGTCTATGACTTGCTGCCGCCACGCTTTGCCCGGCGCCGGCCGCCCTTGTCCAGCATTGGCCGGCTCGACCGCGATACCAGCGGCTTGCTGCTGCTCACCGATGATGGCGCCTTGCTGCACCGGCTCATTGCTCCCGTCTCGTGCGTAAGCAAGGTGTATGTCGCCACCCTGGCGCAGGACCTGCGCGGCGACGAGGCGGACCTGTTCGCCAGCGGCCGCCTGCTGCTGGAAGGGGAGGCGAAGCCCCTGGCGCCGGCCATGCTCGAGGCCTGCGGACCGCGCCGCGTGCGGATCACCGTCACCGAGGGCCGCTATCACCAGGTGCGACGGATGTTCGCCGCCGTGGGCAACCATGTGCAGGCCTTGCACCGGGAGGCGGTCGCCGGCCTGTCGCTCGGTACGCTCCCGCCCGGGGCCTGGCGCGAACTCGAGGGTGGGGAACGGGCGCTGCTGGGCGGAAATCACCAGCCGGGAGTGACGCAGGCGAAGACGCCGGGATGA
PROTEIN sequence
Length: 246
VRLVRLIANLGYGSRKEVAQMFRAGRVTDTDGEVLYADDQVEASSIRVDGAPLDPGSGLVLMLHKPVGYTCSHRDPGQLVYDLLPPRFARRRPPLSSIGRLDRDTSGLLLLTDDGALLHRLIAPVSCVSKVYVATLAQDLRGDEADLFASGRLLLEGEAKPLAPAMLEACGPRRVRITVTEGRYHQVRRMFAAVGNHVQALHREAVAGLSLGTLPPGAWRELEGGERALLGGNHQPGVTQAKTPG*