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scnpilot_solids2_trim150_scaffold_586_31

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: 27107..27664

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Afipia felis ATCC 53690 RepID=K8NR01_AFIFE similarity UNIREF
DB: UNIREF100
  • Identity: 87.0
  • Coverage: 185.0
  • Bit_score: 317
  • Evalue 6.70e-84
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EKS29910.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.0
  • Coverage: 185.0
  • Bit_score: 317
  • Evalue 9.40e-84
RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 58.6
  • Coverage: 181.0
  • Bit_score: 210
  • Evalue 6.20e-52

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 558
GTGCTGCCGTCTCCCGAGGAACTGATCGGTCTGATTGACGCGGTTGCGCGGACGCAGGACCGGAATGCCTTCGCGCGACTTTTCGGGTATTTCGCGCCTCGCGTCAAAAGCTTCCTCATGCGATCGGGCCTTGAAGACGCCGCTGCGGAGGAAATGGCCCAGGAGGTCATGATAGCGGTATGGCGTAAAGCGTCCTATTTCGATCCCGGTAAAGCCGGCGCGTCGACTTGGGTGTTTACGATTGCCCGCAATCAAAGGATCGACCGTCTGCGTCGCACGCGATCTCGGACTGCCGATCATCTTCTGGATCCGACTGATGAACTCGATATGCCCCCTTCGGGTGAAGATATCGCCATCGTTGCCGAACGGGAGGAAGGGGTGCGCAAGGCGTTGGAAAGCCTGCCGATCGATCAGTCAACCATTGTGCGGCTGTCGTTCTTTGCCGAGAAACCGCATGCGGAGATTGCAAGAGAGCTGGGCATTCCTCTCGGCACCGTAAAATCCCGTGTTCGGCTCGCATTGAATCGGCTTCGGACCCTTTTGGACAGCGATATATGA
PROTEIN sequence
Length: 186
VLPSPEELIGLIDAVARTQDRNAFARLFGYFAPRVKSFLMRSGLEDAAAEEMAQEVMIAVWRKASYFDPGKAGASTWVFTIARNQRIDRLRRTRSRTADHLLDPTDELDMPPSGEDIAIVAEREEGVRKALESLPIDQSTIVRLSFFAEKPHAEIARELGIPLGTVKSRVRLALNRLRTLLDSDI*