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scnpilot_solids2_trim150_scaffold_1265_4

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: 5594..6496

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix-domain containing protein AraC type n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XYN2_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 53.5
  • Coverage: 297.0
  • Bit_score: 339
  • Evalue 3.50e-90
  • rbh
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 53.5
  • Coverage: 297.0
  • Bit_score: 339
  • Evalue 1.10e-90
  • rbh
Helix-turn-helix-domain containing protein AraC type {ECO:0000313|EMBL:ACU04514.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.5
  • Coverage: 297.0
  • Bit_score: 339
  • Evalue 4.90e-90

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Taxonomy

Pedobacter heparinus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 903
ATGAAAAGTATTTTTGAACATCAGTCATTACCCAAAGAAATGGGCTTTACCATAAAGGAATATATTCAGCCTCATTTTTCTTCTCCCTATCATTTCCATGATCTATACGAGTTAATTCTGATTGCAAACAGTTATGGCAAACTATATGCAGGCAATAAAGTATTGAATTTTAAAAAGAACGAAGTGTTCATGTTCGGGCCGGGTTTGCCTCATTGCTTTTATAATGAAAAATCATTCGTATCAACGGGAGAGGCTGCACACGCCATCGTTATCTTTTTTAAAGAAGATTTCCTGGGAGAAAATTTCTTCTTACATAACGACCTGATAAGAACAAAAGCGCTGCTTCAGGACTCTGCCTTTGGAATAAAAGTAAAGGAACCCAACGAGGTTATAGAAACATTATTCATGGAAATAACCAAATCAAAAGGTATAGACAGCTTAATAATTTTGTTACAATTACTTAATATGCTCTCAGGCCAGAACGTAGATAAAATCCTAATCAATACGGAATTATCAAAAAGATTCATTACAGATAATGATTCAGCCAGATTAGAACCCTTATTAAAATATATATTTGAAAATTTTAGAAACGATTTAAATATTCAAGAGGCTGCTTCGCTTGCCTGTATGAATGAAGCCGCCTTTTGCCGCTATTTTAAAAGCCGGACAGAACAAACGTTCTCTCAATTCGTAAACCGCGTTAGAATAACTCATGCCACGCGCCTGTTAGCTGCGGAAGAACGAAGCATATCAGATATTTGCTACGAATGTGGTTATGAAAATATATCTTATTTCAACAGGCAGTTCAAAGACATTACCGGCCAAACTCCTATAGCTTATCGTAAAGAGCTCTTATATCCGGACGATAGTTTAAACACCCAAACAGAAGAAGAAATTGGTTAA
PROTEIN sequence
Length: 301
MKSIFEHQSLPKEMGFTIKEYIQPHFSSPYHFHDLYELILIANSYGKLYAGNKVLNFKKNEVFMFGPGLPHCFYNEKSFVSTGEAAHAIVIFFKEDFLGENFFLHNDLIRTKALLQDSAFGIKVKEPNEVIETLFMEITKSKGIDSLIILLQLLNMLSGQNVDKILINTELSKRFITDNDSARLEPLLKYIFENFRNDLNIQEAASLACMNEAAFCRYFKSRTEQTFSQFVNRVRITHATRLLAAEERSISDICYECGYENISYFNRQFKDITGQTPIAYRKELLYPDDSLNTQTEEEIG*