ggKbase home page

scnpilot_solids2_trim150_scaffold_463_29

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: 37154..38725

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein {ECO:0000313|EMBL:EYR68283.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.7
  • Coverage: 442.0
  • Bit_score: 379
  • Evalue 5.70e-102
Helix-turn-helix, Fis-type id=3598858 bin=GWC2_Nitrospirae-rel_56_14 species=Nitrococcus mobilis genus=Nitrococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA similarity UNIREF
DB: UNIREF100
  • Identity: 48.8
  • Coverage: 406.0
  • Bit_score: 371
  • Evalue 1.90e-99
  • rbh
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains; K07715 two-component system, NtrC family, response regulator GlrR similarity KEGG
DB: KEGG
  • Identity: 40.8
  • Coverage: 390.0
  • Bit_score: 278
  • Evalue 4.00e-72

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lysobacter capsici → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1572
GTGCACTTTCTGCGGACCGAGGGATCGCTCGCCTTCCGCGAGTCCCATTGCAATAAATCGATACCGGGCTTGACAATTCTGTACCCGGAGACTATCTCCATACGCACGCGTACCTACGTACTGACTTGGCATTTTGCTTTTGTGCCAGGCCTGCCGGCCGCCAATGTACGCACAGCACGGATGGGCCATTCCGTGAACACGCTTACCTGTGGTGTCGTTGTCGGAGGATGCGCGGAGCCATTGGCCCGGCGCGCCTACGACGTACTCAAGGCTCGCGCGCCAAGGGGGCTCGACATTTCCTGGCAAGCAGGTGTCGGACAACGGGGCCATTGCGATCTCCTGATCTTGCCGGTGCAGGCCGATACGTTCGACCTGGCAAAGGCCGAGATTGCGCACCTGCGCAGGGTGGCGCCAGCGTGCAGCATCATCGTTCTGTGCACGGACTTGCCGGCCGAACAGACGCTCGAGCTGCTGCGTGCCGGCGCGTTCGATTTCGTCTCCGCGGCCTACATGGACGTGGAGCTCGATCCCCGCGTGCAACGGGCCGCCGGCCTGTTGGCCCACACGCAGATGGGCGACACGGCAGCCATCGAGATGGCGCGCGGCCACGACCTGATCGGTTCGAGCGCACCTTTCGTCAAGCAACTGGCCAAGCTGCCGGTGGTTGCCGGCAGCGACGCGAGCGTGCTGCTGTTGGGCGAAACCGGCACGGGCAAGGAAGTCTTTGCCCGGACCATCCATTACCTGTCACCACGTGCGTCGCGGCCGCTGGTTGCGGTCAACTGCGGGGCGATTCCCACAGAGTTGATGGAAAGCGAGCTGTTCGGGTGCGTGCGCGGCGCCTATACCTCGGCGCATGCCGCCCGCCACGGCCTGGTCCAGGAGGCCGAAGGCGGCACCTTGTTCCTGGACGAGATCGACTCCTTGCCGCTGGGCGCCCAGGCCAAGCTGTTGCGTTTCCTGCACGACAAGGAATACCGGCCGGTGGGAGCCAGCCACGCCTGCCATGCGGACGTGCGCGTGATTGCCGCAAGCAACCAGAATCTGGCGGCGCTGGTCGAGCGGGGCGGCTTCCGTCGCGACCTGTATTTCCGCCTCAACGTGCTGAACATCCTGCTGCCGGCCTTGCGCGAGCGGCGCGATGACGTCCCTGAGCTTGCCCGGCATTCCGCCCGCCTGTGCTGCCGTCGCCAACAGCGGGCGATGATCGAGCTGACCACCCCGGCCCTGCGCAAGCTGCTCGAGTACGACTGGCCCGGCAACGTGCGCGAGCTGCACAACGTCATCGAGTGCGCCGTGTTGTTCTGCCGAGGCTGCCTGATCGACGCCGATGACGTGCAACTGCCGGGTGAGCCGGTTGCGGAAGAGGGCGTGGAATCGTTCCGTGATGCCAAGGCGCGCATGGTCGAGTGCTTCGAGCGCAGCTACATCGAGCGCATGCTGGCGGTGAATGCCGGCAACGTCACCCGGGCCGCTTCGGCGGCGCACAAGAATCGGCGTGCCTTCTTTGCACTGATGCGCAAACACGACATCGCATCGGAGCAGTTCCGGCCAGCACTGACAAGGTCATGA
PROTEIN sequence
Length: 524
VHFLRTEGSLAFRESHCNKSIPGLTILYPETISIRTRTYVLTWHFAFVPGLPAANVRTARMGHSVNTLTCGVVVGGCAEPLARRAYDVLKARAPRGLDISWQAGVGQRGHCDLLILPVQADTFDLAKAEIAHLRRVAPACSIIVLCTDLPAEQTLELLRAGAFDFVSAAYMDVELDPRVQRAAGLLAHTQMGDTAAIEMARGHDLIGSSAPFVKQLAKLPVVAGSDASVLLLGETGTGKEVFARTIHYLSPRASRPLVAVNCGAIPTELMESELFGCVRGAYTSAHAARHGLVQEAEGGTLFLDEIDSLPLGAQAKLLRFLHDKEYRPVGASHACHADVRVIAASNQNLAALVERGGFRRDLYFRLNVLNILLPALRERRDDVPELARHSARLCCRRQQRAMIELTTPALRKLLEYDWPGNVRELHNVIECAVLFCRGCLIDADDVQLPGEPVAEEGVESFRDAKARMVECFERSYIERMLAVNAGNVTRAASAAHKNRRAFFALMRKHDIASEQFRPALTRS*