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scnpilot_solids2_trim150_scaffold_463

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_463_1
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..3068
DNA (3066bp) protein (1022aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SJ62_THIDA rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AAZ97308.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
scnpilot_solids2_trim150_scaffold_463_2
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2941..5898)
DNA (2958bp) protein (986aa)
phospholipase C (EC:3.1.4.3); K01114 phospholipase C [EC:3.1.4.3]
Phospholipase C n=1 Tax=Cupriavidus basilensis OR16 RepID=H1RZL6_9BURK
Phospholipase C {ECO:0000313|EMBL:EHP44358.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis OR16.;"
scnpilot_solids2_trim150_scaffold_463_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6253..7764)
DNA (1512bp) protein (504aa)
Ferredoxin-dependent glutamate synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3U3_9GAMM
Ferredoxin-dependent glutamate synthase {ECO:0000313|EMBL:EIL94134.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
glutamate synthase family protein
scnpilot_solids2_trim150_scaffold_463_4
unknown

Not on your lists

comp(7912..8169)
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C7873
scnpilot_solids2_trim150_scaffold_463_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8166..8963)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VVP7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL91288.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids2_trim150_scaffold_463_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9114..9896
DNA (783bp) protein (261aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Dyella ginsengisoli RepID=UPI0003456332
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EIL93462.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
negative regulator of beta-lactamase expression
scnpilot_solids2_trim150_scaffold_463_7
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(9968..12304)
DNA (2337bp) protein (779aa)
hypothetical protein n=2 Tax=Aminicenantes RepID=UPI00036F7079
hypothetical protein; K09955 hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
scnpilot_solids2_trim150_scaffold_463_8
Methylophaga frappieri, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12611..13027
DNA (417bp) protein (139aa)
Membrane protein n=1 Tax=Methylophaga frappieri (strain ATCC BAA-2434 / DSM 25690 / JAM7) RepID=I1YHV1_METFJ
membrane protein; K15977 putative oxidoreductase
Membrane protein {ECO:0000313|EMBL:AFJ02494.1}; TaxID=754477 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylophaga frappieri (strain ATCC BAA-2434 / DSM 25690 / JAM7).;"
scnpilot_solids2_trim150_scaffold_463_9
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13109..13966
DNA (858bp) protein (286aa)
serine/threonine protein kinase involved in cell cycle control; K07178 RIO kinase 1 [EC:2.7.11.1]
Serine/threonine protein kinase involved in cell cycle control n=1 Tax=Rhodanobacter sp. 115 RepID=I4WH10_9GAMM
Serine/threonine protein kinase involved in cell cycle control {ECO:0000313|EMBL:EIL98751.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
scnpilot_solids2_trim150_scaffold_463_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14112..15800
DNA (1689bp) protein (563aa)
N-acyl-D-aspartate/D-glutamate deacylase n=1 Tax=Rhodanobacter denitrificans RepID=M4NL20_9GAMM
N-acyl-D-aspartate/D-glutamate deacylase
N-acyl-D-aspartate/D-glutamate deacylase {ECO:0000313|EMBL:AGG90368.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_463_11
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15982..18006)
DNA (2025bp) protein (675aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VYJ7_9GAMM
Peptidase M1 {ECO:0000313|EMBL:KGI77649.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
aminopeptidase N
scnpilot_solids2_trim150_scaffold_463_12
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18171..19022)
DNA (852bp) protein (284aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00036BE0D5
Uncharacterized protein {ECO:0000313|EMBL:AHY60845.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_463_13
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19264..20223
DNA (960bp) protein (320aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037F6E8C
Uncharacterized protein {ECO:0000313|EMBL:KJV33756.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
magnesium and cobalt transport protein corA; K03284 magnesium transporter
scnpilot_solids2_trim150_scaffold_463_14
RIFOXYA1_FULL_Xanthomonadales_68_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20394..20972
DNA (579bp) protein (193aa)
Putative uncharacterized protein n=1 Tax=Ricinus communis RepID=B9TBM3_RICCO
hypothetical protein
Tax=RIFOXYA1_FULL_Xanthomonadales_68_6_curated
scnpilot_solids2_trim150_scaffold_463_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(21023..22591)
DNA (1569bp) protein (523aa)
Peptidase dimerization domain protein n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2ER18_EMTOG rbh
Peptidase M20 {ECO:0000313|EMBL:AHG89293.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
peptidase dimerization domain protein rbh
scnpilot_solids2_trim150_scaffold_463_16
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22832..23593
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBE7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL96788.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_463_17
unknown

Not on your lists

23925..24686
DNA (762bp) protein (254aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_463_18
unknown

Not on your lists

comp(25011..25700)
DNA (690bp) protein (230aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_463_19
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25914..27812)
DNA (1899bp) protein (633aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000361DEC7
Uncharacterized protein {ECO:0000313|EMBL:EIL92446.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_463_20
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28227..29003
DNA (777bp) protein (259aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Acidiphilium sp. PM RepID=F7S6L2_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EGO95219.1}; Flags: Fragment;; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_463_21
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29226..30305)
DNA (1080bp) protein (360aa)
Psp operon transcriptional activator PspF n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VL45_9GAMM
Psp operon transcriptional activator PspF {ECO:0000313|EMBL:EIL87936.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Psp operon transcriptional activator PspF; K03974 psp operon transcriptional activator rbh
scnpilot_solids2_trim150_scaffold_463_22
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30533..31213
DNA (681bp) protein (227aa)
Phage shock protein A, PspA n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VL46_9GAMM
Phage shock protein A, PspA {ECO:0000313|EMBL:EIL87937.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
pspA; transcriptional regulator of psp operon; K03969 phage shock protein A
scnpilot_solids2_trim150_scaffold_463_23
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31220..31441
DNA (222bp) protein (74aa)
DNA-binding transcriptional regulator of psp operon n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VL47_9GAMM
DNA-binding transcriptional regulator of psp operon {ECO:0000313|EMBL:EIL87938.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
pspB; phage shock protein B; K03970 phage shock protein B
scnpilot_solids2_trim150_scaffold_463_24
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31438..31710
DNA (273bp) protein (91aa)
DNA-binding transcriptional activator of psp operon n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VL48_9GAMM
DNA-binding transcriptional activator of psp operon {ECO:0000313|EMBL:EIL87939.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
pspC; DNA-binding transcriptional activator of psp operon
scnpilot_solids2_trim150_scaffold_463_25
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31715..32107
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VL49_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL87940.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein; K03973 phage shock protein C
scnpilot_solids2_trim150_scaffold_463_26
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32117..32329
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VL50_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL87941.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
scnpilot_solids2_trim150_scaffold_463_27
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(32378..34036)
DNA (1659bp) protein (553aa)
Amidohydrolase family enzyme n=1 Tax=Algoriphagus machipongonensis RepID=A3HV14_9BACT rbh
amidohydrolase rbh
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
scnpilot_solids2_trim150_scaffold_463_28
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

comp(34246..37077)
DNA (2832bp) protein (944aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037933D6
hypothetical protein
Gll0760 protein {ECO:0000313|EMBL:BAC88701.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
scnpilot_solids2_trim150_scaffold_463_29
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37154..38725
DNA (1572bp) protein (524aa)
Uncharacterized protein {ECO:0000313|EMBL:EYR68283.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
Helix-turn-helix, Fis-type id=3598858 bin=GWC2_Nitrospirae-rel_56_14 species=Nitrococcus mobilis genus=Nitrococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA rbh
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains; K07715 two-component system, NtrC family, response regulator GlrR
scnpilot_solids2_trim150_scaffold_463_30
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

Not on your lists

comp(38907..39485)
DNA (579bp) protein (193aa)
hypothetical protein id=1244687 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
Tax=RBG_13_Chloroflexi_66_10_curated
Displaying items 1-30 of 37 in total

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