ggKbase home page

scnpilot_solids2_trim150_scaffold_404_7

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: comp(7522..8319)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, AraC family n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BZY3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 38.9
  • Coverage: 275.0
  • Bit_score: 169
  • Evalue 5.50e-39
Uncharacterized protein {ECO:0000313|EMBL:KFX67710.1}; TaxID=1395571 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas taeanensis MS-3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.5
  • Coverage: 256.0
  • Bit_score: 175
  • Evalue 8.20e-41
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 37.3
  • Coverage: 233.0
  • Bit_score: 146
  • Evalue 9.20e-33

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas taeanensis → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 798
ATGGCGACCCCCCGTGCGGTTTGGATCGATTTTTGCAGAATGCCCCATGCGCATGGCCTCTTTGTGGATGCGCAAGCCGAATGCGATATCGTGCGCATCACCATGACCGAGGCGATCGCCTCGGCTGTCCACAGGCACCAGCCGCACTTCATCTGCATCGAATACGACTATCCCGACCGGGCACGGCTCCGGGCCGTGCCGTTGACGAGGCGCCAATTCCCGGCGCTGCCGCTGCTGATGCTCACCGAGTTTCATTCCGAGGCCCTCGCGGTCTGGGCGTTTCGCTCGCGCGTGTGGGATTACCGGGTCAAGCCAATTGACGAAAGGACACTCGCCCAGCTCGTCGACGCGGCGGCACGCGCCAGCAGGACGGCACCGGGCGACGGCTGGGTGGTCCAGCCTTTTCCGCCCGACCTGATCGCACCCACGGGGCATCTGTGCAGGCCGCTGATCGCCGCACCGCACACGGCCCCCGCCGTCGCCTACATCAGCGAGCACTACGCGGAAGCGTGCCGGATCGAAACCATCGCGCGACTTTGCCATCTGTCCGAGTCCGCGTTCAGCCGCCTGTTTCACCGCGAGCAGGGCGTCTCGTTCAGACGCTTCCTGCTGCAATACCGGATCGCCAGGGCGCGCGATTTCCTGGCCGAGCCCCATGCGTCGGTTTCGCAGGTAGCGTACGCCGTCGGCTTCAACGACTTGTCCCATTTTGGACGGGTGTTCAGGCGCATCGTCGGCATGCCTGCCACCCACTACCAACGCAATCTTCAGCTGCCCACGCAAACCGCACGGACATGA
PROTEIN sequence
Length: 266
MATPRAVWIDFCRMPHAHGLFVDAQAECDIVRITMTEAIASAVHRHQPHFICIEYDYPDRARLRAVPLTRRQFPALPLLMLTEFHSEALAVWAFRSRVWDYRVKPIDERTLAQLVDAAARASRTAPGDGWVVQPFPPDLIAPTGHLCRPLIAAPHTAPAVAYISEHYAEACRIETIARLCHLSESAFSRLFHREQGVSFRRFLLQYRIARARDFLAEPHASVSQVAYAVGFNDLSHFGRVFRRIVGMPATHYQRNLQLPTQTART*