ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

scnpilot_solids2_trim150_scaffold_557_2

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: comp(968..1762)

Top 3 Functional Annotations

Value Algorithm Source
short-chain dehydrogenase n=1 Tax=Segetibacter koreensis RepID=UPI000382C3EF similarity UNIREF
DB: UNIREF100
  • Identity: 74.6
  • Coverage: 260.0
  • Bit_score: 406
  • Evalue 2.70e-110
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:EMS31150.1}; TaxID=1239962 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Mariniradius.;" source="Mariniradius saccharolyticus AK6.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.1
  • Coverage: 260.0
  • Bit_score: 372
  • Evalue 4.60e-100
short-chain dehydrogenase/reductase SDR similarity KEGG
DB: KEGG
  • Identity: 65.8
  • Coverage: 260.0
  • Bit_score: 361
  • Evalue 3.10e-97

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mariniradius saccharolyticus → Mariniradius → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 795
ATGAGATTAAAAGATAAAGTTGTAATCGTAACCGGCAGTACGACAGGAATTGGTAAAGCCATTGTAATACGCTGCGTAGCCGAGGGCGCACGTGTGGTTGTAAACGGGCGCAACCAGGAAGCCGGAGAAGCTGTAGTGAAGGAATTAGGCGAAGGCAATGCTGTCTTACATATAGGCGATGTTGCAGAAGAAGGCGCTGCGCAAAAGCTGGTTGACATTGCCTTGAACGCATTTGGCAGGCTGGATGCAGTAGTGAATAACGCTGCAATGATTGTGTCTTCTAATATTCATACTACTGATCTGGCCTATCTCCGCAGGGTACTTGAAGTAAACACGGTAGCTCCCTTTGCATTAATTCAGGCTGCTTTGCCGCATCTGAGTAAAACACGCGGATGCGCACTCAATATAGGTTCCGTGAATGCCTATAGTGGAGAACCTAATTTGTTGCCTTACAGCATTTCTAAAGGAGCATTGATGACAATGACCCGCAACCTCGGAGACACGCTGCTTCGCGAAGAAGGAGTTCGTGTGAACCAAATTAATCCCGGTTGGGTAGTTACTGAAAATGAAACCATACGCAAACGTGAACATGGCCTTTCAGACGATTGGTATAAAGATATTCCGCGTGTGTATGCGCCTTCAGGCAGAATCCTGTTACCGGAAGAAATTGCAGCCGCAGTGATATACTGGCTCAGCGATGAAAGCGGCCCGGTTTCCGGCCAGGTAATGGATATTGAACAATATCCCTTCATTGGAAGAAATCCACCGAAAGATGCTTCAATGTATGAGTCGTAG
PROTEIN sequence
Length: 265
MRLKDKVVIVTGSTTGIGKAIVIRCVAEGARVVVNGRNQEAGEAVVKELGEGNAVLHIGDVAEEGAAQKLVDIALNAFGRLDAVVNNAAMIVSSNIHTTDLAYLRRVLEVNTVAPFALIQAALPHLSKTRGCALNIGSVNAYSGEPNLLPYSISKGALMTMTRNLGDTLLREEGVRVNQINPGWVVTENETIRKREHGLSDDWYKDIPRVYAPSGRILLPEEIAAAVIYWLSDESGPVSGQVMDIEQYPFIGRNPPKDASMYES*