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scnpilot_solids2_trim150_scaffold_557

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_557_1
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30..917)
DNA (888bp) protein (296aa)
Prophage antirepressor id=2157908 bin=GWB2_Bacteroidetes_32_14 species=Flavobacteria bacterium BAL38 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47 rbh
hypothetical protein rbh
Tax=GWA2_Bacteroidetes_31_9_curated
scnpilot_solids2_trim150_scaffold_557_2
Mariniradius saccharolyticus, Mariniradius, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(968..1762)
DNA (795bp) protein (265aa)
short-chain dehydrogenase n=1 Tax=Segetibacter koreensis RepID=UPI000382C3EF
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:EMS31150.1}; TaxID=1239962 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Mariniradius.;" source="Mariniradius saccharolyticus AK6.;"
short-chain dehydrogenase/reductase SDR
scnpilot_solids2_trim150_scaffold_557_3
Rhodopirellula maiorica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(1767..2789)
DNA (1023bp) protein (341aa)
zinc-type alcohol dehydrogenase (EC:1.1.1.1); K00001 alcohol dehydrogenase [EC:1.1.1.1]
zinc-type alcohol dehydrogenase n=1 Tax=Segetibacter koreensis RepID=UPI00036B33A5 rbh
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:EMI15898.1}; TaxID=1265738 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula maiorica SM1.;"
scnpilot_solids2_trim150_scaffold_557_4
Algoriphagus machipongonensis, Algoriphagus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(2801..3493)
DNA (693bp) protein (231aa)
orotidine 5'-phosphate decarboxylase; K13831 3-hexulose-6-phosphate synthase / 6-phospho-3-hexuloisomerase [EC:4.1.2.43 5.3.1.27]
D-arabino 3-hexulose 6-phosphate aldehyde lyase n=1 Tax=Segetibacter koreensis RepID=UPI00035F20C8 rbh
D-arabino 3-hexulose 6-phosphate formaldehyde lyase {ECO:0000313|EMBL:EAZ82355.1}; TaxID=388413 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Algoriphagus.;" source="Algoriphagus machipongonensis.;"
scnpilot_solids2_trim150_scaffold_557_5
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3841..4485)
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035F5FA9 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI51038.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
scnpilot_solids2_trim150_scaffold_557_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4518..5963)
DNA (1446bp) protein (482aa)
Oxidoreductase domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T828_NIAKG
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:AEV97979.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_557_7
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6093..6731)
DNA (639bp) protein (213aa)
transcriptional initiation protein Tat n=1 Tax=Pedobacter agri RepID=UPI00029A7354
Transcriptional initiation protein Tat {ECO:0000313|EMBL:KEQ28620.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_557_8
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6734..8476)
DNA (1743bp) protein (581aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000366E544
Contig62, whole genome shotgun sequence {ECO:0000313|EMBL:KIO76445.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
glucose-methanol-choline oxidoreductase
scnpilot_solids2_trim150_scaffold_557_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8733..9743)
DNA (1011bp) protein (337aa)
methionyl-tRNA formyltransferase; K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9]
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Methionyl-tRNA formyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL01_NIAKG
scnpilot_solids2_trim150_scaffold_557_10
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9883..11091)
DNA (1209bp) protein (403aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003814982
Uncharacterized protein {ECO:0000313|EMBL:KIC89359.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_557_11
unknown

Not on your lists

comp(11205..11360)
DNA (156bp) protein (52aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_557_12
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11401..11829
DNA (429bp) protein (143aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
FKBP-type peptidylprolyl isomerase; K01802 peptidylprolyl isomerase [EC:5.2.1.8]
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Niabella soli DSM 19437 RepID=H1NKN1_9SPHI
scnpilot_solids2_trim150_scaffold_557_13
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12074..12844
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037902F3
ErfK/YbiS/YcfS/YnhG family protein
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:AEV98904.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_557_14
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12829..14109)
DNA (1281bp) protein (427aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
aspartate kinase; K00928 aspartate kinase [EC:2.7.2.4]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003736BA3
scnpilot_solids2_trim150_scaffold_557_15
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14369..14983)
DNA (615bp) protein (205aa)
Response regulator receiver n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y2F0_PEDHD rbh
response regulator receiver rbh
Response regulator receiver {ECO:0000313|EMBL:ACU05160.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids2_trim150_scaffold_557_16
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14983..16923)
DNA (1941bp) protein (647aa)
ATP-binding region ATPase domain protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y2E9_PEDHD rbh
ATPase rbh
ATP-binding region ATPase domain protein {ECO:0000313|EMBL:ACU05159.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids2_trim150_scaffold_557_17
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17166..18491
DNA (1326bp) protein (442aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y2F5_PEDHD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACU05165.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
scnpilot_solids2_trim150_scaffold_557_18
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18556..19374)
DNA (819bp) protein (273aa)
KilA-N domain protein id=1764409 bin=GWD2_Bacteroidales_45_23 species=Capnocytophaga sp. CM59 genus=Capnocytophaga taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes rbh
DNA-binding protein rbh
Tax=GWC2_Bacteroidetes_46_850_curated
scnpilot_solids2_trim150_scaffold_557_19
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19620..21770
DNA (2151bp) protein (717aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NM64_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF17274.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_557_20
unknown

Not on your lists

21874..23166
DNA (1293bp) protein (431aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_557_21
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23231..24142)
DNA (912bp) protein (304aa)
BRO family, N-terminal domain protein n=1 Tax=Leptospira wolbachii serovar Codice str. CDC RepID=R9A8Q6_9LEPT rbh
BRO family, N-terminal domain protein {ECO:0000313|EMBL:KFC60046.1}; TaxID=1492737 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
prophage antirepressor rbh
scnpilot_solids2_trim150_scaffold_557_22
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24171..25793
DNA (1623bp) protein (541aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NM66_9SPHI rbh
Uncharacterized protein {ECO:0000313|EMBL:AHF17272.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_557_23
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26704..27144
DNA (441bp) protein (147aa)
Thioredoxin Disulfide Isomerase n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GQW0_9SPHI
Thioredoxin Disulfide Isomerase {ECO:0000313|EMBL:EOR93940.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_557_24
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27131..28081
DNA (951bp) protein (317aa)
ApbE family lipoprotein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y230_9SPHI rbh
ApbE family lipoprotein {ECO:0000313|EMBL:EHQ26687.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
ApbE family lipoprotein; K03734 thiamine biosynthesis lipoprotein rbh
scnpilot_solids2_trim150_scaffold_557_25
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

28116..28313
DNA (198bp) protein (66aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI0003670618
Uncharacterized protein {ECO:0000313|EMBL:KIC91086.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
lipoprotein
scnpilot_solids2_trim150_scaffold_557_26
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

28338..29600
DNA (1263bp) protein (421aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YAU2_9SPHI rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ29551.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_557_27
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29620..30105
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037E5679
Uncharacterized protein {ECO:0000313|EMBL:KDP72870.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_557_28
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30257..30688
DNA (432bp) protein (144aa)
Uncharacterized protein id=3983780 bin=GWF2_Geobacter_54_21 species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
Tax=GWC2_Geobacteraceae_55_20_curated
scnpilot_solids2_trim150_scaffold_557_29
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30819..31955)
DNA (1137bp) protein (379aa)
Oxidoreductase domain protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L4S6_HALH1
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:AEE53024.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_solids2_trim150_scaffold_557_30
Prevotella sp. CAG:924, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32103..32984)
DNA (882bp) protein (294aa)
kinase, PfkB family; K00847 fructokinase [EC:2.7.1.4]
2-dehydro-3-deoxygluconokinase n=1 Tax=Anaerophaga thermohalophila RepID=UPI000237D357
Uncharacterized protein {ECO:0000313|EMBL:CCY03551.1}; TaxID=1262938 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:924.;"
Displaying items 1-30 of 31 in total

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