ggKbase home page

scnpilot_solids2_trim150_scaffold_503_24

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: comp(23730..24536)

Top 3 Functional Annotations

Value Algorithm Source
ABC-2 id=2525114 bin=GWF1_Xanthomonadales_69_6 species=Pseudomonas fluorescens genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 49.2
  • Coverage: 262.0
  • Bit_score: 253
  • Evalue 2.20e-64
rfbD2; protein RfbD; K09690 lipopolysaccharide transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 46.8
  • Coverage: 263.0
  • Bit_score: 240
  • Evalue 4.70e-61
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45 similarity UNIPROT
DB: UniProtKB
  • Identity: 52.6
  • Coverage: 268.0
  • Bit_score: 268
  • Evalue 1.20e-68

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

BJP_IG2103_SUB10_Xanthomonadales_61_45 → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 807
GTGCAGCTATCCGACCTCGTCTCCCCGCTTGTCCGCCACCGCGCCCTGCTCGGCGCGCTGAGCCGCCGCGAACTGGCCAGCCGCTACCGCGACTCGTTCCTCGGCAACCTGTGGATGGTGATCACGCCGCTGCTGATGCTGGGGATGTACACCTTCGTGTTCGGCGTGATCTTCCGCTCGCGCTGGGAAGGCGTGGGCGACCACGGCATCGCCACGTTCGCGATCGTGCTGTTCTCCGGCCTGCTGCTGCACAGCCTGCTGGCGGAGACCCTGGGGCGCGCGCCGAAGCTGATCCTGGAGGAGCCGAACTACGTCACCAAGGTGGTGTTTCCGCTGGAGCTGCTGGCCTGGGTGAACATGCTGACCGCGCTGGTGCACTTCGCCATCGGCGTGGTGCTGCTGCTGGTGGTGATGGCGTTCGTGATGCCGCCGGTGCCGCTGGCGACGCTGTGGCTGCCGGTGATCGTGGCGCCGTTCGCGCTGTACCTGCTGGGGCTGGGCTGGGCGCTGTCGGCGGTGGGCGTCTACCTGCGCGACCTGGGGCAGTTCATGGGCACGCTGGTGAGCCTGCTGCTGTTCCTGAGCCCGATCTTCTACCCGCGCGACAAGGCGCCGGCCGGGCTGAGCACCGTGCTGGCCTTCAACCCGCTGACGGTACCGGTGGAGCAGTTCCGCCGCGCGCTGTTCCAGGGCCTGCCGCCGCAGCCGATGGTGCTGGCCGGCTATGCGGCGGGCGGCGTGGTGGCCTACGTGGTGGGGCTGATGATCTTCCAGCAGCTGCGCCGCGGCTTCTCGGACGTGATGTGA
PROTEIN sequence
Length: 269
VQLSDLVSPLVRHRALLGALSRRELASRYRDSFLGNLWMVITPLLMLGMYTFVFGVIFRSRWEGVGDHGIATFAIVLFSGLLLHSLLAETLGRAPKLILEEPNYVTKVVFPLELLAWVNMLTALVHFAIGVVLLLVVMAFVMPPVPLATLWLPVIVAPFALYLLGLGWALSAVGVYLRDLGQFMGTLVSLLLFLSPIFYPRDKAPAGLSTVLAFNPLTVPVEQFRRALFQGLPPQPMVLAGYAAGGVVAYVVGLMIFQQLRRGFSDVM*