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scnpilot_solids2_trim150_scaffold_503

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_503_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..619
DNA (618bp) protein (206aa)
NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1F4_9GAMM
NADH:flavin oxidoreductase/NADH oxidase {ECO:0000313|EMBL:EIL93295.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
NADH:flavin oxidoreductase
scnpilot_solids2_trim150_scaffold_503_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(699..2111)
DNA (1413bp) protein (471aa)
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1F6_9GAMM
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase {ECO:0000313|EMBL:EIL93297.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
scnpilot_solids2_trim150_scaffold_503_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2360..3223)
DNA (864bp) protein (288aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WG47_9GAMM
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:EIL98438.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
scnpilot_solids2_trim150_scaffold_503_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3350..3907)
DNA (558bp) protein (186aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Rhodanobacter denitrificans RepID=I4WSP6_9GAMM
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:EIL93299.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
scnpilot_solids2_trim150_scaffold_503_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3904..4794)
DNA (891bp) protein (297aa)
Glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24) rbh
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WSP5_9GAMM rbh
scnpilot_solids2_trim150_scaffold_503_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4791..5840)
DNA (1050bp) protein (350aa)
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
dTDP-glucose 4,6-dehydratase n=1 Tax=Rhodanobacter denitrificans RepID=M4NE19_9GAMM
scnpilot_solids2_trim150_scaffold_503_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5990..7165
DNA (1176bp) protein (392aa)
cystathionine beta-lyase/cystathionine gamma-synthase (EC:4.4.1.1)
Cystathionine beta-lyase/cystathionine gamma-synthase {ECO:0000313|EMBL:AGG87744.1}; EC=4.4.1.1 {ECO:0000313|EMBL:AGG87744.1};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Cystathionine beta-lyase/cystathionine gamma-synthase n=1 Tax=Rhodanobacter denitrificans RepID=M4NB14_9GAMM
scnpilot_solids2_trim150_scaffold_503_8
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7216..10551
DNA (3336bp) protein (1112aa)
Glycosyl transferase family protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VX60_9GAMM rbh
Glycosyl transferase family protein {ECO:0000313|EMBL:EIL91801.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
glycosyl transferase family protein rbh
scnpilot_solids2_trim150_scaffold_503_9
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10641..11576
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000307FED0 rbh
D-glycero-D-manno-heptose 7-phosphate kinase {ECO:0000313|EMBL:CCF78714.1}; TaxID=1138313 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus S1.;"
putative kinase, galactokinase/mevalonate kinase
scnpilot_solids2_trim150_scaffold_503_10
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11561..12160
DNA (600bp) protein (200aa)
Phosphoheptose isomerase {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089187}; EC=5.3.1.28 {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089180};; Sedoheptulose 7-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00067}; TaxID=1138313 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus S1.;"
gmhA; phosphoheptose isomerase (EC:5.3.1.28)
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002DDCE03
scnpilot_solids2_trim150_scaffold_503_11
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12144..12851
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002DA5100
D-glycero-D-manno-heptose 1-phosphate guanosyltransferase {ECO:0000313|EMBL:CCF78712.1}; TaxID=1138313 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus S1.;"
Nucleoside-diphosphate-sugar pyrophosphorylase family protein
scnpilot_solids2_trim150_scaffold_503_12
Burkholderia caribensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12848..13417
DNA (570bp) protein (190aa)
D,D-heptose 1,7-bisphosphate phosphatase {ECO:0000256|PIRNR:PIRNR004682}; EC=3.1.3.- {ECO:0000256|PIRNR:PIRNR004682};; TaxID=1323664 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia caribensis MBA4.;"
hypothetical protein n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0003611DD4
gmhB; D,D-heptose 1,7-bisphosphate phosphatase family protein
scnpilot_solids2_trim150_scaffold_503_13
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13462..15642)
DNA (2181bp) protein (727aa)
Type II secretory pathway, component PulD id=2525103 bin=GWF1_Xanthomonadales_69_6 species=Beggiatoa alba genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria rbh
gspD; general secretion pathway protein D rbh
Tax=GWF1_Xanthomonadales_69_6_curated
scnpilot_solids2_trim150_scaffold_503_14
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15639..16184)
DNA (546bp) protein (182aa)
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
scnpilot_solids2_trim150_scaffold_503_15
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16171..16758)
DNA (588bp) protein (196aa)
Putative uncharacterized protein id=2525105 bin=GWF1_Xanthomonadales_69_6 species=Pseudomonas sp. genus=unknown taxon_order=unknown taxon_class=unknown phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
scnpilot_solids2_trim150_scaffold_503_16
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16755..17855)
DNA (1101bp) protein (367aa)
Uncharacterized protein id=2525106 bin=GWF1_Xanthomonadales_69_6 species=Beggiatoa alba genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
Tax=BJP_08E140C01_Xanthomonadales_64_42
scnpilot_solids2_trim150_scaffold_503_17
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17836..18930)
DNA (1095bp) protein (365aa)
Type II secretory pathway, component PulK id=2525107 bin=GWF1_Xanthomonadales_69_6 species=Beggiatoa alba genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
scnpilot_solids2_trim150_scaffold_503_18
unknown

Not on your lists

comp(18927..19550)
DNA (624bp) protein (208aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_503_19
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19550..19969)
DNA (420bp) protein (140aa)
Type II secretion system protein id=2525109 bin=GWF1_Xanthomonadales_69_6 species=Beggiatoa sp. PS genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
type II secretion system protein
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
scnpilot_solids2_trim150_scaffold_503_20
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19966..20430)
DNA (465bp) protein (155aa)
id=2525110 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
scnpilot_solids2_trim150_scaffold_503_21
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20396..20836)
DNA (441bp) protein (147aa)
Type II secretion system protein n=4 Tax=Pseudomonas aeruginosa RepID=K1CLP0_PSEAI
general secretion pathway protein G
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
scnpilot_solids2_trim150_scaffold_503_22
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20848..22041)
DNA (1194bp) protein (398aa)
Type II secretion system protein id=2525112 bin=GWF1_Xanthomonadales_69_6 species=Beggiatoa sp. PS genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria rbh
putative type II secretion system protein rbh
Tax=BJP_08E140C01_Xanthomonadales_64_42
scnpilot_solids2_trim150_scaffold_503_23
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22046..23722)
DNA (1677bp) protein (559aa)
Type II secretion protein id=2525113 bin=GWF1_Xanthomonadales_69_6 species=Pseudomonas sp. genus=unknown taxon_order=unknown taxon_class=unknown phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria rbh
type II secretion protein rbh
Tax=BJP_08E140C01_Xanthomonadales_64_42
scnpilot_solids2_trim150_scaffold_503_24
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23730..24536)
DNA (807bp) protein (269aa)
ABC-2 id=2525114 bin=GWF1_Xanthomonadales_69_6 species=Pseudomonas fluorescens genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
rfbD2; protein RfbD; K09690 lipopolysaccharide transport system permease protein
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
scnpilot_solids2_trim150_scaffold_503_25
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25254..26723
DNA (1470bp) protein (490aa)
id=2525115 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
cell wall surface anchor family protein
Tax=GWF1_Xanthomonadales_69_6_curated
scnpilot_solids2_trim150_scaffold_503_26
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26955..28241
DNA (1287bp) protein (429aa)
TagH id=2525116 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria rbh
ABC transporter ATP-binding protein
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
scnpilot_solids2_trim150_scaffold_503_27
BJP_IG2103_SUB10_Xanthomonadales_61_45, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28248..29180
DNA (933bp) protein (311aa)
group 1 glycosyl transferase (EC:2.4.-.-)
Glycosyl transferase, group 1 id=2525118 bin=GWF1_Xanthomonadales_69_6 species=Rhodobacter capsulatus genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
Tax=BJP_IG2103_SUB10_Xanthomonadales_61_45
scnpilot_solids2_trim150_scaffold_503_28
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29168..30034
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Rhodobacter capsulatus YW2 RepID=V8HL63_RHOCA
hypothetical protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
scnpilot_solids2_trim150_scaffold_503_29
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30027..30812
DNA (786bp) protein (262aa)
Sulfotransferase id=2460916 bin=GWF1_Xanthomonadales_69_6 species=Rhodobacter sphaeroides genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
scnpilot_solids2_trim150_scaffold_503_30
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31201..33120)
DNA (1920bp) protein (640aa)
Uncharacterized protein n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IWU3_RHOCS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACJ00767.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
Displaying items 1-30 of 38 in total

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