ggKbase home page

scnpilot_solids2_trim150_scaffold_468_7

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: comp(4456..4965)

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.9
  • Coverage: 169.0
  • Bit_score: 262
  • Evalue 4.30e-67
peptide deformylase (EC:3.5.1.88) similarity KEGG
DB: KEGG
  • Identity: 76.9
  • Coverage: 169.0
  • Bit_score: 259
  • Evalue 1.10e-66
Peptide deformylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXT6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 76.9
  • Coverage: 169.0
  • Bit_score: 262
  • Evalue 3.00e-67

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 510
TTGAGCACGCTTTCCATCCTGGAGTTCCCCGATCCACGCCTGCGCCTGCATGCCGCACCGGTGCAGGTCTTCGACGCGCAACTCAAAAAGCTTGGCGCCGACATGCTGGAAACCATGTACGCCGCCAACGGCGTCGGCCTGGCCGCGATCCAGGTCAACGTGCAGCAGCGCGTCCTGGTGGCCGACATGAGCGAGGAGCGCAACCAGCCGCTGGTGCTGGTCAATGCCAAGGTCGTGGAGCGCCACGGCTCGCAGGTCTACCAGGAAGGTTGCCTGTCCTTTCCCGGCATCTACGCCAACGTGACCCGCGCCCTGGGCGTCACCGTCACCGCCCAGGACCTCGACGGCAAGCCCCTGCGGCTCGAACTCGAGGGCCCGCTGGCGGTGTGCATCCAGCACGAGATCGATCACCTGGACGGCAAGATGTTCGTCGATTACCTGTCGTCGCTGAAACGCGCCATGTTGCTCAAGCGCCTGGACAAGCAACGCCGGCAGGCGGCGAGTGCTTGA
PROTEIN sequence
Length: 170
LSTLSILEFPDPRLRLHAAPVQVFDAQLKKLGADMLETMYAANGVGLAAIQVNVQQRVLVADMSEERNQPLVLVNAKVVERHGSQVYQEGCLSFPGIYANVTRALGVTVTAQDLDGKPLRLELEGPLAVCIQHEIDHLDGKMFVDYLSSLKRAMLLKRLDKQRRQAASA*