name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
scnpilot_solids2_trim150_scaffold_468_1
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2..625)
|
Probable protein kinase UbiB {ECO:0000256|SAAS:SAAS00063507}; EC=2.7.-.- {ECO:0000256|SAAS:SAAS00063486};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
2-octaprenylphenol hydroxylase (EC:1.14.13.-)
Putative ubiquinone biosynthesis protein UbiB n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W782_9GAMM
|
|
scnpilot_solids2_trim150_scaffold_468_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(622..1269)
|
Sterol-binding domain-containing protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W781_9GAMM
Sterol-binding domain-containing protein {ECO:0000313|EMBL:EIL95322.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
|
|
scnpilot_solids2_trim150_scaffold_468_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1266..1742)
|
tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmL {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WF34_9GAMM
putative rRNA methylase SpoU family
|
|
scnpilot_solids2_trim150_scaffold_468_4
unknown
|
Not on your lists |
comp(1783..1995)
|
This feature has no annotations |
|
scnpilot_solids2_trim150_scaffold_468_5
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2181..3506)
|
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00274011};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
16S rRNA m(5)C-967 methyltransferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase RsmB n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLP3_9GAMM
|
|
scnpilot_solids2_trim150_scaffold_468_6
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3503..4459)
|
Methionyl-tRNA formyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGN1_9GAMM
methionyl-tRNA formyltransferase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
|
|
scnpilot_solids2_trim150_scaffold_468_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4456..4965)
|
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
peptide deformylase (EC:3.5.1.88)
Peptide deformylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXT6_9GAMM
|
|
scnpilot_solids2_trim150_scaffold_468_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5158..6297
|
LysM domain-containing protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGM9_9GAMM
LysM domain-containing protein {ECO:0000313|EMBL:EIL98620.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
LysM domain-containing protein
|
|
scnpilot_solids2_trim150_scaffold_468_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6387..7601
|
DNA protecting protein DprA n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGM8_9GAMM
DNA protecting protein DprA {ECO:0000313|EMBL:EIL98619.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
DNA protecting protein DprA
|
|
scnpilot_solids2_trim150_scaffold_468_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7733..10294
|
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
DNA topoisomerase 1 n=1 Tax=Rhodanobacter denitrificans RepID=M4NIH6_9GAMM
DNA topoisomerase I, bacterial
|
|
scnpilot_solids2_trim150_scaffold_468_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10295..10867
|
Threonylcarbamoyl-AMP synthase {ECO:0000256|HAMAP-Rule:MF_01852, ECO:0000256|SAAS:SAAS00012127}; Short=TC-AMP synthase {ECO:0000256|HAMAP-Rule:MF_01852};; EC=2.7.7.87 {ECO:0000256|HAMAP-Rule:MF_01852, ECO:0000256|SAAS:SAAS00012122};; L-threonylcarbamoyladenylate synthase {ECO:0000256|HAMAP-Rule:MF_01852}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaC {ECO:0000256|HAMAP-Rule:MF_01852}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaC {ECO:0000256|HAMAP-Rule:MF_01852}; TaxID=1163409 sp
Threonylcarbamoyl-AMP synthase n=1 Tax=Rhodanobacter denitrificans RepID=I4WK61_9GAMM
putative translation factor (SUA5)
|
|
scnpilot_solids2_trim150_scaffold_468_12
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10867..12237
|
Acyl-CoA synthetase/AMP-acid ligase n=1 Tax=Rhodanobacter denitrificans RepID=M4NM61_9GAMM
acyl-CoA synthetase/AMP-acid ligase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
|
|
scnpilot_solids2_trim150_scaffold_468_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12322..13614
|
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Phosphoribosylamine--glycine ligase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGM4_9GAMM
phosphoribosylamine--glycine ligase
|
|
scnpilot_solids2_trim150_scaffold_468_14
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13792..14679
|
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQP7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89538.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
|
|
scnpilot_solids2_trim150_scaffold_468_15
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14859..15026)
|
50S ribosomal protein L33 n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRC4_9GAMM
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
ribosomal protein L33
|
|
scnpilot_solids2_trim150_scaffold_468_16
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15036..15272)
|
50S ribosomal protein L28 n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRC3_9GAMM
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
LSU ribosomal protein L28P
|
|
scnpilot_solids2_trim150_scaffold_468_17
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15601..16107
|
Protein-export protein SecB n=1 Tax=Rhodanobacter denitrificans RepID=I4WJN2_9GAMM
protein translocase subunit secB
Protein-export protein SecB {ECO:0000256|HAMAP-Rule:MF_00821}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
scnpilot_solids2_trim150_scaffold_468_18
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16116..17141
|
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
glycerol-3-phosphate dehydrogenase (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRC1_9GAMM
|
|
scnpilot_solids2_trim150_scaffold_468_19
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17328..20291
|
DNA/RNA helicase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCN9_9GAMM
DNA/RNA helicase {ECO:0000313|EMBL:EIL97230.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
DNA/RNA helicase, superfamily II, SNF2 family
|
|
scnpilot_solids2_trim150_scaffold_468_20
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20384..21403)
|
Glucokinase {ECO:0000313|EMBL:EIL89755.1}; EC=2.7.1.2 {ECO:0000313|EMBL:EIL89755.1};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Glucokinase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRB4_9GAMM
glucokinase
|
|
scnpilot_solids2_trim150_scaffold_468_21
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21556..22548
|
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Delta-aminolevulinic acid dehydratase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCP5_9GAMM
delta-aminolevulinic acid dehydratase
|
|
scnpilot_solids2_trim150_scaffold_468_22
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22679..24049)
|
Glutamate--cysteine ligase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCP8_9GAMM
glutamate--cysteine ligase, plant type
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
|
|
scnpilot_solids2_trim150_scaffold_468_23
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24215..26122)
|
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Transcription termination factor Rho n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ39_9GAMM
rbh
transcription termination factor Rho
rbh
|
|
scnpilot_solids2_trim150_scaffold_468_24
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26284..26676)
|
thioredoxin n=1 Tax=Dyella ginsengisoli RepID=UPI00034D6C81
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
thioredoxin; K03671 thioredoxin 1
|
|
scnpilot_solids2_trim150_scaffold_468_25
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26985..28754
|
ATP-dependent RNA helicase RhlB {ECO:0000256|HAMAP-Rule:MF_00661, ECO:0000256|SAAS:SAAS00011806}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00661, ECO:0000256|SAAS:SAAS00011808};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
ATP-dependent RNA helicase RhlB n=2 Tax=Rhodanobacter denitrificans RepID=M4NKJ1_9GAMM
DNA/RNA helicase, superfamily II
|
|
scnpilot_solids2_trim150_scaffold_468_26
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28901..29578
|
Cell division ATP-binding protein FtsE n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ36_9GAMM
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:EIL89327.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
cell division ATP-binding protein FtsE
|
|
scnpilot_solids2_trim150_scaffold_468_27
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29575..30546
|
Cell division protein FtsX n=1 Tax=Rhodanobacter denitrificans RepID=I4WX89_9GAMM
cell division protein
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
|
|
scnpilot_solids2_trim150_scaffold_468_28
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30642..31559
|
Two-component system response regulator n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WTA8_9GAMM
Two-component system response regulator {ECO:0000313|EMBL:EIM02700.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
response regulator containing a CheY-like receiver domain and a GGDEF domain
|
|
scnpilot_solids2_trim150_scaffold_468_29
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
31556..32242
|
Uracil-DNA glycosylase (EC:3.2.2.-)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Uracil-DNA glycosylase n=1 Tax=Rhodanobacter denitrificans RepID=I4WX87_9GAMM
|
|
scnpilot_solids2_trim150_scaffold_468_30
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
32400..33260
|
RNA polymerase sigma factor RpoH n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VZU0_9GAMM
rbh
alternative sigma factor RpoH
rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
|