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scnpilot_solids2_trim150_scaffold_945_2

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: 1781..2413

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoE n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXS0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 84.5
  • Coverage: 187.0
  • Bit_score: 317
  • Evalue 7.60e-84
RNA polymerase sigma factor RpoE {ECO:0000313|EMBL:EIL92011.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.5
  • Coverage: 187.0
  • Bit_score: 317
  • Evalue 1.10e-83
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 75.2
  • Coverage: 210.0
  • Bit_score: 306
  • Evalue 5.50e-81

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 633
ATGAACCCAGACAAGCAGATCGCCCAGGTCACGCCCTTGCGGGGGATTCTAAGCGTGCCTAACGCCGCAAACGACACCGCACTGGATGCACAGTACTGGTCGACGCAAATGGCTGCCGTGTCGGTGCATCGCGACCGCGCCAGTTTCATGTGCGTCTACGACTATTTTGCCCCGCGGCTGCAGCGCTACCTGCGCAACATGCACGTGCCGGAGTCGATGGCCGACGAACTCGTGCAGGAGGCGTTGTTGATCTTGTGGCGCAAGGCCGACACGTTTGATCCTGCGCGGGCCAGCCTGGCAACTTGGCTGTACCGGGTGGCGCGCAATCTGTACATCGACCACGTCCGCAAAGAACCGCACTGGCTGCCTGTGCAGGAGGGACTGGACCGGCTCGATCGTGCCGAATCCGATCGGCGCGATTCGCAGCCGGAATCGATTTTCGATCAAGACCTGTTGAGGCAGGCAATCGACCACCTTCCACCAATGCAGGCCAAACTGGTGCGCATGTCTTATCTCGAAAGTAAAACGCACAGTGAGATTTCGCGGGAACTGGATATGCCGCTGGGCTCGGTCAAGTCTTCGCTACGGCGTTCGTTTGCGAAACTGCAAGGCAGCATGGGGGCCCCGCGATGA
PROTEIN sequence
Length: 211
MNPDKQIAQVTPLRGILSVPNAANDTALDAQYWSTQMAAVSVHRDRASFMCVYDYFAPRLQRYLRNMHVPESMADELVQEALLILWRKADTFDPARASLATWLYRVARNLYIDHVRKEPHWLPVQEGLDRLDRAESDRRDSQPESIFDQDLLRQAIDHLPPMQAKLVRMSYLESKTHSEISRELDMPLGSVKSSLRRSFAKLQGSMGAPR*