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scnpilot_solids2_trim150_scaffold_945

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_945_1
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..1524
DNA (1524bp) protein (508aa)
Aminopeptidase N n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCR0_9GAMM
Aminopeptidase {ECO:0000313|EMBL:GAN45090.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibacter sediminis.;"
aminopeptidase N
scnpilot_solids2_trim150_scaffold_945_2
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1781..2413
DNA (633bp) protein (211aa)
RNA polymerase sigma factor RpoE n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXS0_9GAMM
RNA polymerase sigma factor RpoE {ECO:0000313|EMBL:EIL92011.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
RNA polymerase sigma factor, sigma-70 family
scnpilot_solids2_trim150_scaffold_945_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2410..3072
DNA (663bp) protein (221aa)
Anti-ECFsigma factor ChrR n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXR9_9GAMM
Anti-ECFsigma factor ChrR {ECO:0000313|EMBL:EIL92010.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
anti-ECFsigma factor, ChrR
scnpilot_solids2_trim150_scaffold_945_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3080..4516
DNA (1437bp) protein (479aa)
Deoxyribodipyrimidine photolyase n=1 Tax=Rhodanobacter denitrificans RepID=M4ND67_9GAMM
deoxyribodipyrimidine photolyase
Deoxyribodipyrimidine photolyase {ECO:0000313|EMBL:AGG87383.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_945_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4601..5713
DNA (1113bp) protein (371aa)
Catalase-related peroxidase {ECO:0000256|PIRNR:PIRNR000296}; EC=1.11.1.- {ECO:0000256|PIRNR:PIRNR000296};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
catalase; K03781 catalase [EC:1.11.1.6]
Catalase-related peroxidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXQ7_9GAMM
scnpilot_solids2_trim150_scaffold_945_6
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5710..6339
DNA (630bp) protein (210aa)
Cytochrome b561 protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXQ6_9GAMM
Cytochrome b561 protein {ECO:0000313|EMBL:EIL91997.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
yodB; cytochrome b561
scnpilot_solids2_trim150_scaffold_945_7
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6493..6993)
DNA (501bp) protein (167aa)
TspO and MBR like protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXR7_9GAMM
TspO and MBR like protein {ECO:0000313|EMBL:EIL92008.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
tryptophan-rich sensory protein
scnpilot_solids2_trim150_scaffold_945_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7216..8199
DNA (984bp) protein (328aa)
Fatty-acid desaturase n=1 Tax=Rhodanobacter denitrificans RepID=M4NHT1_9GAMM
fatty-acid desaturase
Fatty-acid desaturase {ECO:0000313|EMBL:AGG87381.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_945_9
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8203..9507
DNA (1305bp) protein (435aa)
Dehydrogenase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXR4_9GAMM
Dehydrogenase {ECO:0000313|EMBL:EIL92005.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative NAD/FAD-binding protein
scnpilot_solids2_trim150_scaffold_945_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9498..10298
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WX20_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87379.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_945_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10321..11616
DNA (1296bp) protein (432aa)
Cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Rhodanobacter denitrificans RepID=I4WX19_9GAMM rbh
methyltransferase, cyclopropane fatty acid synthase rbh
Methyltransferase, cyclopropane fatty acid synthase {ECO:0000313|EMBL:AGG87378.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_945_12
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11613..12167
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXR1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92002.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Protein of unknown function (DUF2878)
scnpilot_solids2_trim150_scaffold_945_13
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12164..12946
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXR0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL92001.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_945_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12943..14025
DNA (1083bp) protein (361aa)
Methyltransferase, cyclopropane fatty acid synthase n=1 Tax=Rhodanobacter denitrificans RepID=M4NAA7_9GAMM
methyltransferase, cyclopropane fatty acid synthase
Methyltransferase, cyclopropane fatty acid synthase {ECO:0000313|EMBL:AGG87375.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_945_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14064..14615
DNA (552bp) protein (184aa)
Bacterial lipocalin n=1 Tax=Rhodanobacter denitrificans RepID=M4NAB4_9GAMM
bacterial lipocalin
Bacterial lipocalin {ECO:0000313|EMBL:AGG87374.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_945_16
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14879..15862
DNA (984bp) protein (328aa)
Alpha/beta hydrolase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VR63_9GAMM
Alpha/beta hydrolase {ECO:0000313|EMBL:EIL89704.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
putative hydrolase or acyltransferase of alpha/beta superfamily
scnpilot_solids2_trim150_scaffold_945_17
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15984..16595
DNA (612bp) protein (204aa)
Putative Fa2h protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VR64_9GAMM
sterol desaturase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_945_18
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16653..17423)
DNA (771bp) protein (257aa)
Putative metal-dependent hydrolase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W763_9GAMM
Putative metal-dependent hydrolase {ECO:0000313|EMBL:EIL95304.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
putative metal-dependent hydrolase
scnpilot_solids2_trim150_scaffold_945_19
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17568..18485)
DNA (918bp) protein (306aa)
Recombination-associated protein RdgC n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCU7_9GAMM
DNA recombination-dependent growth factor C
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_945_20
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18595..19797)
DNA (1203bp) protein (401aa)
Aspartate/tyrosine/aromatic aminotransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NIB9_9GAMM
aspartate/tyrosine/aromatic aminotransferase
Aspartate/tyrosine/aromatic aminotransferase {ECO:0000313|EMBL:AGG90644.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_945_21
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19937..20143
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCU4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97285.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
uncharacterized conserved small protein containing a coiled-coil domain
scnpilot_solids2_trim150_scaffold_945_22
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20136..20774
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W774_9GAMM
acetyltransferase, ribosomal protein N-acetylase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids2_trim150_scaffold_945_23
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20844..22205)
DNA (1362bp) protein (454aa)
CDP-diacylglycerol--serine O-phosphatidyltransferase {ECO:0000256|PIRNR:PIRNR000850}; EC=2.7.8.8 {ECO:0000256|PIRNR:PIRNR000850};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Phosphatidylserine synthase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VR75_9GAMM
phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase
scnpilot_solids2_trim150_scaffold_945_24
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22260..22661)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WF31_9GAMM
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
Displaying 24 items

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