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scnpilot_solids2_trim150_scaffold_1424_2

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: 1268..3268

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E332BF similarity UNIREF
DB: UNIREF100
  • Identity: 82.2
  • Coverage: 670.0
  • Bit_score: 1053
  • Evalue 0.0
  • rbh
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.5
  • Coverage: 670.0
  • Bit_score: 1042
  • Evalue 0.0
RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor similarity KEGG
DB: KEGG
  • Identity: 79.9
  • Coverage: 685.0
  • Bit_score: 1037
  • Evalue 0.0
  • rbh

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Taxonomy

Microvirga lotononidis → Microvirga → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2001
ATGGCGACGAAAACGACCGAAAAAGAAGAAGTCGAAACGAATGACGAGAAGAGCCCGGACAGCTCGCCTCTGGACCTTTCGGATGCCGCCGTCAAGCGGCTGATCAAGCTCGCCAAGAAGCGCGGGCATGTGACCTATGACGAGATCAATGCCGTTCTGCCCTCGGAGGAAGTGTCTTCCGAGCAGATCGAGGACATTCTCGCCATGTTCAACGAAATGGGCATCAACGTCATCGAGGCCGAGGAGGCCGACGAAGGCGAGAGCGCCAAGGAAGAAGGCGGCAGCGACGACGACGAGGGCGATGGCGAGCTTGTCGAGAGCCGCTCCACTGCCGTGGTCAAGACCGAGACCAAGGAGCCGACCGAGCGCACCGACGATCCCGTGCGCATGTATCTGCGCGAGATGGGCTCGGTGGAACTGCTGTCGCGCGAAGGCGAGATCGCCATCGCCAAGCGCATCGAGGCCGGCCGCGAGGCGATGATCGCCGGGCTTTGCGAAAGCCCGCTCTCGTTCCAGGCCATCATCATCTGGCGCGACGAACTGAACGACGCCAAGGTACTGCTGCGCGACATCATCGATCTCGAGGCGACCTATGCCGGTCCGGACGGCAAGGCCGTGCCGAAGGTCGAGGGCGCCGATCCGCTCGACGAGCCGGAAGCCAAGGCCCAGGGCGAAGGCGGCGAGGATGCCGCGGCCCCCGAAGGCGACCTCGACGATGACGAGTTCGAGGGCGGCATTTCGCTCTCCGCCATGGAAGCGGAGCTGAAGCCGCGCGTCGTCGAAACCTTCGATCGCATTGCCGACAATTACAAGAAGCTGCGCCGGCTCCAGGTCGAGAATGTCGAGGGCCGGCTCAAGAACGAGTCGCTGTCACCCTCGCAGGAGCGCCGCTACAAGAAGCTCAAGGAAGAGATCGTCGTCGACGTCAAGTCGTTGTCGCTCAACAACAATCGTATCGAGGCGCTGGTCGAGCAGCTCTACGACATCAACAAGAAGCTGATCGGTCTCGAGGGCCGGCTGATGCGGCTCGCCGAAAGCTATGGCGTCGACCGGCTCGACTTCCTGAAGAACTACCAGGGCGCCGAACTCGATCCGAAATGGAACCTGCGCGTCTCCAAGCTCGGCGCGCGCGGCTGGAAGGATTTCGTCGCTAACGAACTCGAGCGCATCAAGGATTTGCGCGGCGAGATTCATATGCTGGCCAGCGAGACCGGCCTGGAAATCCAGGAATTCCGCAAGATCGTCTCGATGGTGCAGAAGGGCGAGCGAGAAGCGCGCCAGGCCAAGAAGGAGATGGTCGAGGCCAACCTTCGCCTGGTGATCTCGATCGCCAAGAAATACACCAATCGCGGCCTGCAGTTCCTCGACCTGATCCAGGAAGGCAATATCGGCCTGATGAAGGCGGTCGATAAGTTCGAGTACCGGCGCGGCTACAAGTTCTCGACCTACGCCACATGGTGGATCAGGCAGGCGATCACGCGCTCGATCGCCGACCAGGCCCGCACGATCCGCATTCCGGTGCATATGATCGAGACGATCAACAAGATCGTGCGCACCTCGCGCCAGATGCTGCACGAGATCGGCCGCGAGCCGACGCCGGAGGAATTGGCGGAAAAGCTTGCCATGCCGCTGGAAAAGGTGCGGAAGGTGCTGAAAATCGCCAAGGAGCCGATCAGCCTCGAGACGCCGATCGGCGACGAGGAGGATTCTCATCTCGGCGATTTCATCGAGGACAAGAACGCCATCCTGCCGATCGACGCGGCGATCCAGGCCAATCTGCGCGAGACGACGACGCGGGTTCTGGCCTCGCTCACGCCGCGCGAGGAGCGCGTGCTGCGCATGCGTTTCGGCATCGGCATGAACACCGACCACACGCTGGAAGAGGTCGGGCAGCAGTTCTCGGTGACGCGCGAGCGCATCCGGCAGATCGAGGCCAAGGCGCTCAGGAAGCTCAAGCACCCGAGCCGGTCGCGCAAGCTCAGGAGCTTCCTGGACAATTGA
PROTEIN sequence
Length: 667
MATKTTEKEEVETNDEKSPDSSPLDLSDAAVKRLIKLAKKRGHVTYDEINAVLPSEEVSSEQIEDILAMFNEMGINVIEAEEADEGESAKEEGGSDDDEGDGELVESRSTAVVKTETKEPTERTDDPVRMYLREMGSVELLSREGEIAIAKRIEAGREAMIAGLCESPLSFQAIIIWRDELNDAKVLLRDIIDLEATYAGPDGKAVPKVEGADPLDEPEAKAQGEGGEDAAAPEGDLDDDEFEGGISLSAMEAELKPRVVETFDRIADNYKKLRRLQVENVEGRLKNESLSPSQERRYKKLKEEIVVDVKSLSLNNNRIEALVEQLYDINKKLIGLEGRLMRLAESYGVDRLDFLKNYQGAELDPKWNLRVSKLGARGWKDFVANELERIKDLRGEIHMLASETGLEIQEFRKIVSMVQKGEREARQAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKIVRTSRQMLHEIGREPTPEELAEKLAMPLEKVRKVLKIAKEPISLETPIGDEEDSHLGDFIEDKNAILPIDAAIQANLRETTTRVLASLTPREERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKLKHPSRSRKLRSFLDN*