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scnpilot_solids2_trim150_scaffold_1831_1

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: comp(3..335)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor rpoD n=1 Tax=Segetibacter koreensis RepID=UPI000375E1C3 similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 111.0
  • Bit_score: 215
  • Evalue 2.80e-53
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor similarity KEGG
DB: KEGG
  • Identity: 93.7
  • Coverage: 111.0
  • Bit_score: 209
  • Evalue 6.30e-52
RNA polymerase, sigma 70 subunit, RpoD subfamily {ECO:0000313|EMBL:ACU63643.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.7
  • Coverage: 111.0
  • Bit_score: 209
  • Evalue 2.80e-51

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 333
ATGAGGCAACTTAAAATTGCTACGCAGATTACCAATCGTGATTCACAAGCGGTTGAAAAGTATCTGCAGGAAATTTCTAAAATTGGGATGATTACCCCGGAAGAGGAAACTATTTTAGCACAGAAAATCAAAATGGGCGACCAAAGGGCTTTAGAGCGCCTTACCACAGCCAATCTACGTTTCGTAGTTTCAGTTGCAAAACAGTATCAGCATCAGGGCTTATCATTGAGCGATTTGATCAACGAGGGCAACCTCGGCTTAATAAAAGCGGCACAACGCTTTGATGAAACCAAGGGTTTCAAATTTATTTCTTATGCCGTGTGGTGGATTCGC
PROTEIN sequence
Length: 111
MRQLKIATQITNRDSQAVEKYLQEISKIGMITPEEETILAQKIKMGDQRALERLTTANLRFVVSVAKQYQHQGLSLSDLINEGNLGLIKAAQRFDETKGFKFISYAVWWIR