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scnpilot_solids2_trim150_scaffold_1831

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1831_1
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3..335)
DNA (333bp) protein (111aa)
RNA polymerase sigma factor rpoD n=1 Tax=Segetibacter koreensis RepID=UPI000375E1C3
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor
RNA polymerase, sigma 70 subunit, RpoD subfamily {ECO:0000313|EMBL:ACU63643.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_1831_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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704..2335
DNA (1632bp) protein (544aa)
glucose-6-phosphate isomerase; K01810 glucose-6-phosphate isomerase [EC:5.3.1.9]
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 1146
Glucose-6-phosphate isomerase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJ10_NIAKG
scnpilot_solids2_trim150_scaffold_1831_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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comp(2453..2914)
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000373EC70
PUR-alpha/beta/gamma DNA/RNA-binding protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_1831_4
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3034..4863)
DNA (1830bp) protein (610aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000360CDD8 rbh
ABC transporter {ECO:0000313|EMBL:KIC94952.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
xenobiotic-transporting ATPase; K06147 ATP-binding cassette, subfamily B, bacterial
scnpilot_solids2_trim150_scaffold_1831_5
Polaribacter sp. Hel1_33_49, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(4872..5609)
DNA (738bp) protein (246aa)
Capsular polysaccharide biosynthesis protein, putative n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GVA7_9SPHI
Capsular polysaccharide biosynthesis protein {ECO:0000313|EMBL:KGL60308.1}; TaxID=1336803 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. Hel1_33_49.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1831_6
Shewanella decolorationis, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5628..6473)
DNA (846bp) protein (282aa)
Glycosyl transferase 2 family protein n=1 Tax=Shewanella decolorationis S12 RepID=V1DFS7_9GAMM
Glycosyl transferase 2 family protein {ECO:0000313|EMBL:ESE41262.1}; TaxID=1353536 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella decolorationis S12.;"
family 2 glycosyl transferase
scnpilot_solids2_trim150_scaffold_1831_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(6599..8329)
DNA (1731bp) protein (577aa)
Carbamoyltransferase; K00612 carbamoyltransferase [EC:2.1.3.-] rbh
Carbamoyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TLD2_NIAKG rbh
Carbamoyltransferase {ECO:0000313|EMBL:AEW03005.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_1831_8
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(8396..8950)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QQ75_SPILD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB39508.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
scnpilot_solids2_trim150_scaffold_1831_9
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

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comp(9144..10289)
DNA (1146bp) protein (382aa)
hypothetical protein n=1 Tax=Anaerophaga thermohalophila RepID=UPI000365ADF0
glycosyl transferase family protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
scnpilot_solids2_trim150_scaffold_1831_10
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(10354..11763)
DNA (1410bp) protein (470aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035D3478 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE50749.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
scnpilot_solids2_trim150_scaffold_1831_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(11760..12677)
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000377D467
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:AEW03000.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying 11 items

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