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scnpilot_solids2_trim150_scaffold_385_7

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: 6320..7510

Top 3 Functional Annotations

Value Algorithm Source
Translation initiation factor eIF4, subunit A n=1 Tax=Chondrus crispus RepID=R7QA60_CHOCR similarity UNIREF
DB: UNIREF100
  • Identity: 54.6
  • Coverage: 379.0
  • Bit_score: 409
  • Evalue 4.70e-111
  • rbh
Translation initiation factor eIF4, subunit A {ECO:0000313|EMBL:CDF34301.1}; TaxID=2769 species="Eukaryota; Rhodophyta; Florideophyceae; Gigartinales; Gigartinaceae; Chondrus.;" source="Chondrus crispus (Carrageen Irish moss) (Polymorpha crispa).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.6
  • Coverage: 379.0
  • Bit_score: 409
  • Evalue 6.60e-111
hypothetical protein; K03257 translation initiation factor 4A similarity KEGG
DB: KEGG
  • Identity: 53.5
  • Coverage: 387.0
  • Bit_score: 400
  • Evalue 6.90e-109
  • rbh

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Taxonomy

Chondrus crispus → Chondrus → Gigartinales → Florideophyceae → Eukaryota

Sequences

DNA sequence
Length: 1191
ATGACGGATAAAGCAACTGAAACGTTCTCAAAATTCGACCTCATGGGCATATCCGATGATATTCTCAGAGGTATTCATGCATATGGCTTTGAATTGCCTTCGGCTATTCAACAGCGTGCTATTGTTCCACTTGCTCGCGGTGATGATATTATCGCACAAGCACAATCAGGAACAGGAAAAACCGGGGCATTTGTTATCGGTTCCCTTCAAAGAATAGATTTATCTCAGCCAGTTACACAAGTTCTAATTATTTCACCAACACGTGAATTAGCATCGCAAACACACAAAGTAGTCACACACATTAGTGCATCTATGAAAGATATTGTAGTTGCCTTATGTGTTGGTGGAAGTCCGTTAATGGTTGACATCCAGGCCTTCCGGAAAAGTACTCCACATATAGTTGTTGCTACTCCTGGTCGCGTATTTGACCTTGTTGAACGAAACATTTTACAACTCAATAAACTGCGAACAATTGTAATTGATGAAGCTGACCAAATGCTTGATAAAGATTTCAAATTGCAAATTGCCGATATTTTCGATAAGGGGCGAATTCCTAATTCGGCGCAAATTGCAATCTTTTCCGCAACAATGCCTCCTGAAACGGAAAAATTTGCAAACTCAATTATGTCAAGCAGTGGAAAAGAACCCACCAAAATTCTCATTAAAACCCAAGAAGTTACGCTTGAAGGTATTTCGCAATATTTCATTGATATTGAACGTGAAGATTGGAAATTCTCTGTTCTTTGTGATATTTACGGTGTTATTACGATTCAGCAAACAATTATTTACCGTAATACACGCGAAGGTGCTGAAGATTTACAACGGATGCTTCGACGTGAAAATTTCAACGTTGAATGTATTCATGGTGATATGACACAACCGGAACGCGATGCTTGTATGCAAAATTTCCGTGAAGGAAAAAGTCGCGTGCTTATTGCAACGGACCTTCTTGCACGCGGTATTGATGTACAAACTGTGTCGCTTGTCATTAATTACGACATTCCGACAAGTCGTGAAACATATATTCATCGTATTGGCCGCAGTGGCCGATATGGTCGCAAAGGTGTTGCTATTAATTTTGTGACCAAACGAGATGTTGCACAGCTACATGAAATTGAAAAATATTACAATACATTGATTCTTGAAATGCCCGCTCTCCGCGAAATCGGTTCACTACTTGGTAAACTATAG
PROTEIN sequence
Length: 397
MTDKATETFSKFDLMGISDDILRGIHAYGFELPSAIQQRAIVPLARGDDIIAQAQSGTGKTGAFVIGSLQRIDLSQPVTQVLIISPTRELASQTHKVVTHISASMKDIVVALCVGGSPLMVDIQAFRKSTPHIVVATPGRVFDLVERNILQLNKLRTIVIDEADQMLDKDFKLQIADIFDKGRIPNSAQIAIFSATMPPETEKFANSIMSSSGKEPTKILIKTQEVTLEGISQYFIDIEREDWKFSVLCDIYGVITIQQTIIYRNTREGAEDLQRMLRRENFNVECIHGDMTQPERDACMQNFREGKSRVLIATDLLARGIDVQTVSLVINYDIPTSRETYIHRIGRSGRYGRKGVAINFVTKRDVAQLHEIEKYYNTLILEMPALREIGSLLGKL*