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scnpilot_solids2_trim150_scaffold_385

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_385_1
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(151..630)
DNA (480bp) protein (160aa)
Lysophospholipase n=1 Tax=Caulobacter crescentus OR37 RepID=R0EGH2_CAUCE
Lysophospholipase {ECO:0000313|EMBL:ENZ80377.1}; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
GF10932 gene product from transcript GF10932-RA
scnpilot_solids2_trim150_scaffold_385_2
Microcystis sp. T1-4, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(681..1391)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Microcystis sp. T1-4 RepID=I4ICR1_9CHRO
Uncharacterized protein {ECO:0000313|EMBL:CCI32085.1}; TaxID=1160279 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis sp. T1-4.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_385_3
unknown

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1421..1861
DNA (441bp) protein (147aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_385_4

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comp(2141..3433)
DNA (1293bp) protein (431aa)
Chlorovirus glycoprotein repeat domain-containing protein n=1 Tax=Paramecium bursaria Chlorella virus OR0704.2.2 RepID=M1IA04_9PHYC
Chlorovirus glycoprotein repeat domain-containing protein {ECO:0000313|EMBL:AGE59086.1}; TaxID=1278265 species="Viruses; dsDNA viruses, no RNA stage; Phycodnaviridae; Chlorovirus; unclassified Chlorovirus.;" source="Paramecium bursaria Chlorella virus OR0704.2.2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_385_5

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comp(3435..4595)
DNA (1161bp) protein (387aa)
Chlorovirus glycoprotein repeat domain-containing protein n=1 Tax=Acanthocystis turfacea Chlorella virus Canal-1 RepID=M1HKP0_9PHYC
Chlorovirus glycoprotein repeat domain-containing protein {ECO:0000313|EMBL:AGE50221.1}; TaxID=1278270 species="Viruses; dsDNA viruses, no RNA stage; Phycodnaviridae; Chlorovirus; unclassified Chlorovirus.;" source="Acanthocystis turfacea Chlorella virus Canal-1.;"
scnpilot_solids2_trim150_scaffold_385_6

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comp(4921..6231)
DNA (1311bp) protein (437aa)
Chlorovirus glycoprotein repeat domain-containing protein n=1 Tax=Acanthocystis turfacea Chlorella virus MN0810.1 RepID=M1IAY4_9PHYC
Chlorovirus glycoprotein repeat domain-containing protein {ECO:0000313|EMBL:AGE55655.1}; TaxID=1278272 species="Viruses; dsDNA viruses, no RNA stage; Phycodnaviridae; Chlorovirus; unclassified Chlorovirus.;" source="Acanthocystis turfacea Chlorella virus MN0810.1.;"
YadA-like protein
scnpilot_solids2_trim150_scaffold_385_7
Chondrus crispus, Chondrus, Gigartinales, Florideophyceae, Eukaryota

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6320..7510
DNA (1191bp) protein (397aa)
Translation initiation factor eIF4, subunit A n=1 Tax=Chondrus crispus RepID=R7QA60_CHOCR rbh
Translation initiation factor eIF4, subunit A {ECO:0000313|EMBL:CDF34301.1}; TaxID=2769 species="Eukaryota; Rhodophyta; Florideophyceae; Gigartinales; Gigartinaceae; Chondrus.;" source="Chondrus crispus (Carrageen Irish moss) (Polymorpha crispa).;"
hypothetical protein; K03257 translation initiation factor 4A rbh
scnpilot_solids2_trim150_scaffold_385_8
unknown

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7573..8244
DNA (672bp) protein (224aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_385_9
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

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8310..8903
DNA (594bp) protein (198aa)
Putative uncharacterized protein id=4001580 bin=GWF2_Bacteroidetes_38_335 species=Cytophaga hutchinsonii genus=Cytophaga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
leucine-rich repeat-containing protein
Tax=GWF2_Bacteroidetes_38_335_curated
scnpilot_solids2_trim150_scaffold_385_10
Providencia sneebia, Providencia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8970..9500
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Providencia sneebia DSM 19967 RepID=K8WYE3_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:EKT61245.1}; TaxID=1141660 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Providencia.;" source="Providencia sneebia DSM 19967.;"
leucine-rich repeat-containing protein
scnpilot_solids2_trim150_scaffold_385_11
unknown

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9905..10717
DNA (813bp) protein (271aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_385_12
Pyronema omphalodes, Pyronema, Pezizales, Pezizomycetes, Ascomycota, Fungi

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10762..11847
DNA (1086bp) protein (362aa)
hypothetical protein; K08073 bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
Similar to Bifunctional polynucleotide phosphatase/kinase acc. no. O13911 n=1 Tax=Pyronema omphalodes (strain CBS 100304) RepID=U4KWQ4_PYROM
Similar to Bifunctional polynucleotide phosphatase/kinase acc. no. O13911 {ECO:0000313|EMBL:CCX05942.1}; TaxID=1076935 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Pezizomycetes; Pezizales; Pyronemataceae; Pyronema.;" source="Pyronema omphalodes (strain CBS 100304) (Pyronema confluens).;"
scnpilot_solids2_trim150_scaffold_385_13
unknown

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comp(11844..12440)
DNA (597bp) protein (199aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_385_14
R_RIF_OD1_11_46_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

12538..13668
DNA (1131bp) protein (377aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALMg9 RepID=UPI00035E883B
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_46_13_curated
scnpilot_solids2_trim150_scaffold_385_15

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comp(13655..14785)
DNA (1131bp) protein (377aa)
prs; ribose-phosphate pyrophosphokinase; K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
Ribose-phosphate pyrophosphokinase n=1 Tax=Bacteriovorax marinus (strain ATCC BAA-682 / DSM 15412 / SJ) RepID=E1X180_BACMS
Uncharacterized protein {ECO:0000313|EMBL:KKK87355.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
scnpilot_solids2_trim150_scaffold_385_16
unknown

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14817..16175
DNA (1359bp) protein (453aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_385_17
unknown

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comp(16197..17183)
DNA (987bp) protein (329aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_385_18
unknown

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comp(17571..17969)
DNA (399bp) protein (133aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_385_19
unknown

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comp(18085..18567)
DNA (483bp) protein (161aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_385_20
unknown

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comp(18685..19290)
DNA (606bp) protein (202aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_385_21

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19941..20837
DNA (897bp) protein (299aa)
Putative uncharacterized protein n=1 Tax=Organic Lake phycodnavirus 1 RepID=F2Y1C1_9PHYC
Putative uncharacterized protein {ECO:0000313|EMBL:ADX05913.1}; TaxID=938081 species="Viruses; dsDNA viruses, no RNA stage; Phycodnaviridae; environmental samples.;" source="Organic Lake phycodnavirus 1.;"
scnpilot_solids2_trim150_scaffold_385_22
unknown

Not on your lists

20921..22441
DNA (1521bp) protein (507aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_385_23
Tetrapisispora phaffii, Tetrapisispora, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

Not on your lists

comp(22407..23384)
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Tetrapisispora phaffii (strain ATCC 24235 / CBS 4417 / NBRC 1672 / NRRL Y-8282 / UCD 70-5) RepID=G8BMM8_TETPH
TPHA0A00710; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCE61156.1}; TaxID=1071381 species="Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Tetrapisispora.;" source="Tetrapisispora phaffii (strain ATCC 24235 / CBS 4417 / NBRC 1672 /; NRRL Y-8282 / UCD 70-5) (Yeast) (Fabospora phaffii).;"
scnpilot_solids2_trim150_scaffold_385_24
Solanum tuberosum, Solanum, Solanales, asterids, Streptophyta, Viridiplantae

Not on your lists

23596..24597
DNA (1002bp) protein (334aa)
Uncharacterized protein n=2 Tax=Solanum tuberosum RepID=M1CDW4_SOLTU
Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400065401}; TaxID=4113 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum.;" source="Solanum tuberosum (Potato).;"
dnaJ protein homolog
scnpilot_solids2_trim150_scaffold_385_25
unknown

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24706..25575
DNA (870bp) protein (290aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_385_26
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(25577..26530)
DNA (954bp) protein (318aa)
PREDICTED: keratin, type II cytoskeletal 3 n=1 Tax=Odobenus rosmarus divergens RepID=UPI0002C56AD4
PE-PGRS family protein {ECO:0000313|EMBL:EYF06939.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
Conserved protein of unknown function, PE-PGRS family protein PE_PGRS54
scnpilot_solids2_trim150_scaffold_385_27
Naegleria gruberi, Naegleria, Schizopyrenida, Heterolobosea, Eukaryota

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comp(26568..27254)
DNA (687bp) protein (229aa)
Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VDK8_NAEGR
hypothetical protein
Predicted protein {ECO:0000313|EMBL:EFC44916.1}; TaxID=5762 species="Eukaryota; Heterolobosea; Schizopyrenida; Vahlkampfiidae; Naegleria.;" source="Naegleria gruberi (Amoeba).;"
scnpilot_solids2_trim150_scaffold_385_28
Alistipes sp. CAG:157, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27251..29770)
DNA (2520bp) protein (840aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1262692 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:157.;"
DNA topoisomerase I (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2]
DNA topoisomerase I n=1 Tax=Thiomicrospira halophila RepID=UPI000381F7CD
scnpilot_solids2_trim150_scaffold_385_29
unknown

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comp(29928..30380)
DNA (453bp) protein (151aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_385_30
unknown

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comp(30467..31147)
DNA (681bp) protein (227aa)

This feature has no annotations

Displaying items 1-30 of 62 in total

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