ggKbase home page

scnpilot_solids2_trim150_scaffold_2015_7

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: comp(5986..6561)

Top 3 Functional Annotations

Value Algorithm Source
CRISPR-associated protein, Cse2 family n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CSJ9_TRURR similarity UNIREF
DB: UNIREF100
  • Identity: 38.4
  • Coverage: 203.0
  • Bit_score: 112
  • Evalue 5.70e-22
Cse2 family CRISPR-associated protein similarity KEGG
DB: KEGG
  • Identity: 38.4
  • Coverage: 203.0
  • Bit_score: 112
  • Evalue 1.80e-22
CRISPR-associated protein, Cse2 family {ECO:0000313|EMBL:ADI15419.1}; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.4
  • Coverage: 203.0
  • Bit_score: 112
  • Evalue 8.10e-22

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Truepera radiovictrix → Truepera → Deinococcales → Deinococci → Deinococcus-Thermus → Bacteria

Sequences

DNA sequence
Length: 576
GTGACGGAATCATACTTGTCTGACCGCTTCGCGCAGCACCTGCGCAAGGTGCTGGAGGGGCCTGGACGTGCGCGTGCTGTCTTGCGCAGATCTCTGACTTTGCCACCAGGGGAGTCAATGGCGGCAATACCCTACGTCGAACCCTTCGTGGCCACCGCGGGCAAATGGACGAGGAAGTGCGCCTACCTGGTTGCTGGAGTCAGCGCCGCTTCAGGGGTTGATGTCGGCAGCGGAAGCTTGGGTGCTGCAGCTGCTCGCTTGAGGCTGAGGACTGATTCTAAGTCGGTTGAGACTCGTTTCCTGGCCTTGCTTGACGCTGACGAAGAGCAGTTGCCGTATCGGTTGCGCCAGATGATCGTGCTTATGGCTGGGAACGAGATCGCGCCCGATTGGGCTGGACTCTTCCGGGACCTCAGGCGGTGGCAGGCACCAGGCAGGCCCGCGCAGATCATGTGGGCACGCGACTACTACACCGTTGTCGGCTCTGCGGGAGTCGAAGACGTTGAGGGTGATGAAGGTCCCGACGACGAGCTGAGTGAAACGAGATTCAACCCAGATGAAGTTCAGGAAGATTAG
PROTEIN sequence
Length: 192
VTESYLSDRFAQHLRKVLEGPGRARAVLRRSLTLPPGESMAAIPYVEPFVATAGKWTRKCAYLVAGVSAASGVDVGSGSLGAAAARLRLRTDSKSVETRFLALLDADEEQLPYRLRQMIVLMAGNEIAPDWAGLFRDLRRWQAPGRPAQIMWARDYYTVVGSAGVEDVEGDEGPDDELSETRFNPDEVQED*