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scnpilot_solids2_trim150_scaffold_2015

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2015_1
Propionibacterium acidipropionici, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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1..537
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Propionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM 6432 / NBRC 12425 / NCIMB 8070) RepID=K7SNJ6_PROA4
Uncharacterized protein {ECO:0000313|EMBL:AFV90760.1}; TaxID=1171373 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM; 6432 / NBRC 12425 / NCIMB 8070).;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2015_2
Deinococcus phoenicis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(2344..2664)
DNA (321bp) protein (107aa)
CRISPR-associated protein Cas2 n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BDY3_MEISD
CRISPR-associated protein Cas2 {ECO:0000313|EMBL:EYB69784.1}; TaxID=1476583 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus phoenicis.;"
CRISPR-associated protein Cas2
scnpilot_solids2_trim150_scaffold_2015_3
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(2645..3586)
DNA (942bp) protein (314aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; Flags: Precursor;; TaxID=526227 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) (Thermus; silvanus).;"
CRISPR-associated endonuclease Cas1 n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BDY2_MEISD rbh
CRISPR-associated protein Cas1; K15342 CRISP-associated protein Cas1 rbh
scnpilot_solids2_trim150_scaffold_2015_4
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(3583..4188)
DNA (606bp) protein (202aa)
CRISPR-associated protein, Cse3 family n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BDY1_MEISD
Cse3 family CRISPR-associated protein
CRISPR-associated protein, Cse3 family {ECO:0000313|EMBL:ADH63132.1}; TaxID=526227 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) (Thermus; silvanus).;"
scnpilot_solids2_trim150_scaffold_2015_5
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4179..4826)
DNA (648bp) protein (216aa)
CRISPR-associated protein cas5/casd, subtype I-e n=1 Tax=Pseudomonas aeruginosa M8A.4 RepID=U9S7S1_PSEAI
CRISPR-associated protein Cas5
CRISPR-associated protein cas5/casd, subtype I-e {ECO:0000313|EMBL:ERV77270.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BL04.;"
scnpilot_solids2_trim150_scaffold_2015_6
Meiothermus ruber, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(4849..5976)
DNA (1128bp) protein (376aa)
CRISPR-associated protein Cse4 n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034ADD46
Cse4 family CRISPR-associated protein
Strain A contig00088, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ53679.1}; TaxID=277 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus ruber.;"
scnpilot_solids2_trim150_scaffold_2015_7
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(5986..6561)
DNA (576bp) protein (192aa)
CRISPR-associated protein, Cse2 family n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CSJ9_TRURR
Cse2 family CRISPR-associated protein
CRISPR-associated protein, Cse2 family {ECO:0000313|EMBL:ADI15419.1}; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
scnpilot_solids2_trim150_scaffold_2015_8
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(6558..8123)
DNA (1566bp) protein (522aa)
CRISPR-associated protein, Cse1 family n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CSK0_TRURR
Cse1 family CRISPR-associated protein
CRISPR-associated protein, Cse1 family {ECO:0000313|EMBL:ADI15420.1}; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
scnpilot_solids2_trim150_scaffold_2015_9
Meiothermus ruber, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(8126..10705)
DNA (2580bp) protein (860aa)
CRISPR-associated helicase Cas3 n=1 Tax=Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) RepID=D3PQD1_MEIRD
CRISPR-associated helicase Cas3; K07012
CRISPR-associated helicase Cas3 {ECO:0000313|EMBL:AGK04779.1}; TaxID=504728 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21); (Thermus ruber).;"
scnpilot_solids2_trim150_scaffold_2015_10
unknown

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comp(10810..11049)
DNA (240bp) protein (80aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_2015_11
unknown

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comp(11585..11776)
DNA (192bp) protein (64aa)

This feature has no annotations

Displaying 11 items

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