ggKbase home page

scnpilot_solids2_trim150_scaffold_1076_7

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: comp(4367..5920)

Top 3 Functional Annotations

Value Algorithm Source
Integrase, catalytic region n=1 Tax=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) RepID=A1TZZ5_MARAV similarity UNIREF
DB: UNIREF100
  • Identity: 56.0
  • Coverage: 507.0
  • Bit_score: 586
  • Evalue 3.70e-164
  • rbh
Integrase {ECO:0000313|EMBL:AHK80033.1}; TaxID=1354791 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Halorhodospira.;" source="Halorhodospira halochloris str. A.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.7
  • Coverage: 508.0
  • Bit_score: 589
  • Evalue 6.10e-165
integrase catalytic subunit similarity KEGG
DB: KEGG
  • Identity: 56.0
  • Coverage: 507.0
  • Bit_score: 586
  • Evalue 1.20e-164
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halorhodospira halochloris → Halorhodospira → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1554
ATGCGGAAGATCAGAGAGGTCCTGCGCCTGTTGTGGGATCAGGGCCGCAGTATTCGTGAGGTGGCGCGGAGTTGCGCTCTGGCGCGCAGCACGGTGGGTGAGTACGAGCGCCGCGCCGTGGCGGCGGGCTTGGGGTGGCCGCTGCCGGAGGTGGATGACGCTGGCCTGGAGGCGTTGCTGTTCCCGCCGGCGCCCATCATCGCGCCGGATCAGCGGCCGTTGCCGGACTGGCACGCGCTGGATCTGGAGCTGAGGCGCAAGAAGGGCGTGACCAGGATGCTTTTGTGGCAGGAGTACCGCGCGCAGCATCCGGATGGGTACTCTTACACGCGTTTCTGCGAGCTGCTGCAGGAGTGGCGCGGCCTGCAGGGCTTGTCGATGCGGCAGGCTCACTTGGCGGGTGAGAAGGTGTTCGTGGATTACGCCGGGGTCACGGTGCCGATCGTTGATGCGGGTACGGGCGAGATCGGTGAGGCGCAGGTGTTCGTGGGCGCGTTGGGCGGCAGTCATTACGCGTTCGTGGAGGCGACCTGGACGCAAGCGCTGCCCGACTGGATCGGCTCGCACGCGCGGATGCTGGCGTTCTTCGGTGGCTGCCCGCAGGTCGTGGTGCCCGACAACTTGAAGGCGGGCGTGACGAGCCCGCACCTGTACGAGCCGGACTTGAACCCGACTTACTTGGAGTTCGCGCGGCATTACGGGCTGGCGGTGATTCCCGCGCGCGCCAGCAAGCCGAAGGACAAGGCGGTGGTTGAATCGGCGGTGCAGGTAGCGGAGAGATGGATCTTAGCGCGCCTGCGCAACCGCACGTTCTTCAGCCTGCAGGAACTGAACGACGCCATCTGGGGACTCTTGAGCGAGTTCAACGCCAAGCCGTTCCAGAAGCGGCCAGGTTCGCGCCTTTCGAACTTCGAGGAGCTCGATAAGCCCGCCCTTAAGCCGTTGCCAGCGGAGCGGTACGTGTTCGCCAGGTGGGCGAAGGTGCGGGCGCACGTGGATTATCACGTGAGCATCGATAAGCACCATTACTCGGTGCCGCATCAGCTCGCCAAGATCCAGCTCGACGCGCGCATCACGGCCGCGACCATCGAGTTGTTCCACCAGGGCAAGCGCGTGGCGAGCCACGCCAGGGCGAGTAGGAAGGGCGGGCACACCACCATCAGAGAGCACATGCCGATCGCGCATCAGGCGCAGGCCGGCATGACGAGGGAGAAGCTCTTGGCGCAAGCGGAGCGCATCGGGCCGGCCACCGCGGAGTTCGTTGCCGGCGTGATCAGCCAGCGCGCGCACGAGCAGCAGGCGTTCAGGTCGATCCTTGGGGTGCTGAGGCTCGGGAAGAAGTACGGCGACACCCGCTTGGAGGCGGCCTGCAACAGGGCGGTGAAGCTCGGGTCGTTCTCGTTCAAGAGCATCGACGCGATCCTGAAGAACAACCTCGATAAGCAGCCGCTGCCCGAACCCGCGCCGGCGCCGCTACCCAAGGCGGCGCACGTGAACGTGCGCGGCGCCGCCTACTACGACACCAACGACCGGGAAGGAACGCCCGCATGCTGA
PROTEIN sequence
Length: 518
MRKIREVLRLLWDQGRSIREVARSCALARSTVGEYERRAVAAGLGWPLPEVDDAGLEALLFPPAPIIAPDQRPLPDWHALDLELRRKKGVTRMLLWQEYRAQHPDGYSYTRFCELLQEWRGLQGLSMRQAHLAGEKVFVDYAGVTVPIVDAGTGEIGEAQVFVGALGGSHYAFVEATWTQALPDWIGSHARMLAFFGGCPQVVVPDNLKAGVTSPHLYEPDLNPTYLEFARHYGLAVIPARASKPKDKAVVESAVQVAERWILARLRNRTFFSLQELNDAIWGLLSEFNAKPFQKRPGSRLSNFEELDKPALKPLPAERYVFARWAKVRAHVDYHVSIDKHHYSVPHQLAKIQLDARITAATIELFHQGKRVASHARASRKGGHTTIREHMPIAHQAQAGMTREKLLAQAERIGPATAEFVAGVISQRAHEQQAFRSILGVLRLGKKYGDTRLEAACNRAVKLGSFSFKSIDAILKNNLDKQPLPEPAPAPLPKAAHVNVRGAAYYDTNDREGTPAC*