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scnpilot_solids2_trim150_scaffold_1076

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1076_1
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

447..929
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBC5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47653.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1076_2
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

929..2008
DNA (1080bp) protein (360aa)
Integrase family protein n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CXP3_TRURR
integrase family protein
Integrase family protein {ECO:0000313|EMBL:ADI14645.1}; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;" source="Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 /; RQ-24).;"
scnpilot_solids2_trim150_scaffold_1076_3
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2043..2729
DNA (687bp) protein (229aa)
Uncharacterized protein {ECO:0000313|EMBL:KJS02787.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium BRH_c16a.;"
scnpilot_solids2_trim150_scaffold_1076_4
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

Not on your lists

2829..3224
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Haemophilus sp. oral taxon 851 str. F0397 RepID=H1LQC0_9PAST
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
scnpilot_solids2_trim150_scaffold_1076_5
unknown

Not on your lists

3376..3468
DNA (93bp) protein (31aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1076_6
Halorhodospira halochloris, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3537..4373)
DNA (837bp) protein (279aa)
ISPsy14, transposition helper protein n=1 Tax=Pseudomonas stutzeri NF13 RepID=M2VNU8_PSEST rbh
ATPase AAA {ECO:0000313|EMBL:AHK78905.1}; TaxID=1354791 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Halorhodospira.;" source="Halorhodospira halochloris str. A.;"
IstB ATP binding domain-containing protein rbh
scnpilot_solids2_trim150_scaffold_1076_7
Halorhodospira halochloris, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4367..5920)
DNA (1554bp) protein (518aa)
Integrase, catalytic region n=1 Tax=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) RepID=A1TZZ5_MARAV rbh
Integrase {ECO:0000313|EMBL:AHK80033.1}; TaxID=1354791 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Halorhodospira.;" source="Halorhodospira halochloris str. A.;"
integrase catalytic subunit rbh
scnpilot_solids2_trim150_scaffold_1076_8
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6033..6458)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Nocardiopsis potens RepID=UPI000378191F
hypothetical protein
Tax=RBG_16_Anaeromyxobacter_69_14_curated
scnpilot_solids2_trim150_scaffold_1076_9
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6538..7047)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CE32_MYXFH
hypothetical protein
Tax=RBG_16_Anaeromyxobacter_69_14_curated
scnpilot_solids2_trim150_scaffold_1076_10
Arthrobacter sp. FB24, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7516..9690)
DNA (2175bp) protein (725aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B78266
y4oA; hypothetical protein
UBA/THIF-type NAD/FAD binding protein {ECO:0000313|EMBL:ABK05651.1}; TaxID=290399 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. (strain FB24).;"
scnpilot_solids2_trim150_scaffold_1076_11
unknown

Not on your lists

comp(9683..10144)
DNA (462bp) protein (154aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1076_12
unknown

Not on your lists

comp(10222..10791)
DNA (570bp) protein (190aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1076_13
Bacillus sp. NRRL B-14911, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10788..11141)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B042_9BACI
Uncharacterized protein {ECO:0000313|EMBL:EAR63198.1}; TaxID=313627 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. NRRL B-14911.;"
XRE family transcriptional regulator
scnpilot_solids2_trim150_scaffold_1076_14
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11450..11794
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Synechococcus sp. PCC 7336 RepID=UPI000347F26D
Uncharacterized protein {ECO:0000313|EMBL:ETX08195.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1076_15
unknown

Not on your lists

12084..12368
DNA (285bp) protein (95aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1076_16
RBG_16_OP11_45_19_curated, Microgenomates, Bacteria

Not on your lists

comp(12521..13096)
DNA (576bp) protein (192aa)
hypothetical protein MstaS_06691 id=4498680 bin=GWA2_OP3_52_12 species=Marinobacterium stanieri genus=Marinobacterium taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
Tax=RBG_16_OP11_45_19_curated
scnpilot_solids2_trim150_scaffold_1076_17
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

13191..14024
DNA (834bp) protein (278aa)
Resolvase domain protein n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XG75_9CHRO
Resolvase domain protein
Resolvase domain protein {ECO:0000313|EMBL:AFZ31630.1}; TaxID=1173026 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 7428.;"
scnpilot_solids2_trim150_scaffold_1076_18
Arthrobacter sp. FB24, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14024..14974
DNA (951bp) protein (317aa)
Transcriptional regulator, IclR family n=1 Tax=Arthrobacter sp. (strain FB24) RepID=A0K0Q2_ARTS2
IclR family transcriptional regulator; K02624 IclR family transcriptional regulator, pca regulon regulatory protein
Transcriptional regulator, IclR family {ECO:0000313|EMBL:ABK04872.1}; TaxID=290399 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. (strain FB24).;"
scnpilot_solids2_trim150_scaffold_1076_19
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14991..16694)
DNA (1704bp) protein (568aa)
N-methylhydantoinase A (EC:3.5.2.9); K01469 5-oxoprolinase (ATP-hydrolysing) [EC:3.5.2.9]
N-methylhydantoinase A/acetone carboxylase, beta subunit n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z3H7_9RHIZ
N-methylhydantoinase A/acetone carboxylase, beta subunit {ECO:0000313|EMBL:EIM30769.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
scnpilot_solids2_trim150_scaffold_1076_20
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16687..18774)
DNA (2088bp) protein (696aa)
hydantoinase/oxoprolinase; K01469 5-oxoprolinase (ATP-hydrolysing) [EC:3.5.2.9] rbh
N-methylhydantoinase A/acetone carboxylase, beta subunit n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z3H7_9RHIZ rbh
N-methylhydantoinase A/acetone carboxylase, beta subunit {ECO:0000313|EMBL:EIM30769.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
scnpilot_solids2_trim150_scaffold_1076_21
S_OP1_64_32, KB1, Bacteria

Not on your lists

19114..20730
DNA (1617bp) protein (539aa)
Extracellular solute-binding protein family 5 id=4092058 bin=GWC2_Chloroflexi_73_18 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
extracellular solute-binding protein
Tax=S_OP1_64_32
scnpilot_solids2_trim150_scaffold_1076_22
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

20898..21884
DNA (987bp) protein (329aa)
binding-protein-dependent transport system inner membrane protein; K02033 peptide/nickel transport system permease protein id=14632297 bin=bin9_gal15 species=Desulfomicrobium baculatum genus=Desulfomicrobium taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
ABC transporter permease; K02033 peptide/nickel transport system permease protein
Tax=CSP1_3_Armatimonadetes
scnpilot_solids2_trim150_scaffold_1076_23
S_OP1_64_32, KB1, Bacteria

Not on your lists

21884..22750
DNA (867bp) protein (289aa)
Inner membrane ABC transporter permease protein yddQ n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L1M0_THERP
inner membrane ABC transporter permease YddQ; K02034 peptide/nickel transport system permease protein
Tax=S_OP1_64_32
scnpilot_solids2_trim150_scaffold_1076_24
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22782..23930
DNA (1149bp) protein (383aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00036F6591
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_47_11_curated
scnpilot_solids2_trim150_scaffold_1076_25
Mycobacterium canettii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24364..24540
DNA (177bp) protein (59aa)
Transposase, IS21 family protein n=1 Tax=Mycobacterium canettii (strain CIPT 140010059) RepID=G0TNJ6_MYCCP
Transposase IS21 family (fragment)
Transposase, IS21 family protein {ECO:0000313|EMBL:CCC44445.1}; TaxID=1048245 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacterium canettii (strain CIPT 140010059).;"
scnpilot_solids2_trim150_scaffold_1076_26
Mycobacterium canettii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24561..25445
DNA (885bp) protein (295aa)
Transposase orfab subunit b n=1 Tax=Mycobacterium canettii (strain CIPT 140010059) RepID=G0TGZ6_MYCCP
transposase orfab subunit b
Transposase orfab subunit b {ECO:0000313|EMBL:CCC43448.1}; TaxID=1048245 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacterium canettii (strain CIPT 140010059).;"
scnpilot_solids2_trim150_scaffold_1076_27

Not on your lists

comp(25456..26142)
DNA (687bp) protein (229aa)
Transposase of ISCARN68, IS256 family n=1 Tax=mine drainage metagenome RepID=E6PZ24_9ZZZZ
Transposase of ISCARN68, IS256 family {ECO:0000313|EMBL:CBI08122.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
transposase mutator type
scnpilot_solids2_trim150_scaffold_1076_28
Caldithrix abyssi, Caldithrix, Bacteria

Not on your lists

comp(26111..26500)
DNA (390bp) protein (130aa)
Transposase mutator type n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XQB2_9BACT
Transposase mutator type {ECO:0000313|EMBL:EHO39999.1}; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
transposase for insertion sequence element ISRM5
scnpilot_solids2_trim150_scaffold_1076_29

Not on your lists

comp(26885..28036)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6Q7N4_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI03209.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1076_30
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28353..28631)
DNA (279bp) protein (93aa)
Integrase catalytic region n=10 Tax=Methylobacterium extorquens DSM 13060 RepID=H1KHI7_METEX
Integrase catalytic region {ECO:0000313|EMBL:EHP73599.1}; Flags: Fragment;; TaxID=882800 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens DSM 13060.;"
putative transposase-related protein
Displaying items 1-30 of 33 in total

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