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scnpilot_solids2_trim150_scaffold_645_15

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: comp(16456..16713)

Top 3 Functional Annotations

Value Algorithm Source
Phage transcriptional regulator, AlpA n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CKX6_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 78.8
  • Coverage: 66.0
  • Bit_score: 106
  • Evalue 1.10e-20
phage transcriptional regulator AlpA similarity KEGG
DB: KEGG
  • Identity: 78.8
  • Coverage: 66.0
  • Bit_score: 106
  • Evalue 3.40e-21
Phage transcriptional regulator, AlpA {ECO:0000313|EMBL:ACS21127.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.8
  • Coverage: 66.0
  • Bit_score: 106
  • Evalue 1.50e-20

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 258
ATGCCGCTCACACAACCTACCGATCACCGCGACACCCGTCACGTGTCCAAGGTGCCTCCAGCATTCTTCCGCATGACCGACGTGATACGCATTACAGCGTTGAGCCGTGCCACTTTGTACCGTCGTATCGCTGAAGGGAAATTCCCAGCCCCCGTTAACCTCGGGGGACGTGCGTGCGGTTGGACACCCGCAGCGCTACAAGCCTGGATTGACGATCCCGCAGGCTATTCGATCGCGATTTCCCATCCCGACGCGTGA
PROTEIN sequence
Length: 86
MPLTQPTDHRDTRHVSKVPPAFFRMTDVIRITALSRATLYRRIAEGKFPAPVNLGGRACGWTPAALQAWIDDPAGYSIAISHPDA*