ggKbase home page

scnpilot_solids2_trim150_scaffold_1143_7

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: 4960..5595

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase factor sigma-70 {ECO:0000313|EMBL:EIM02695.1}; EC=2.7.7.6 {ECO:0000313|EMBL:EIM02695.1};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.1
  • Coverage: 211.0
  • Bit_score: 308
  • Evalue 6.50e-81
RNA polymerase factor sigma-70 n=1 Tax=Rhodanobacter sp. 115 RepID=I4WTA3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 71.1
  • Coverage: 211.0
  • Bit_score: 308
  • Evalue 4.60e-81
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 75.0
  • Coverage: 196.0
  • Bit_score: 294
  • Evalue 3.70e-77

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter sp. 115 → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 636
ATGGAGTCGAAGCATGCCGCCGATGACGATACGGACGGGAACGCCGTGAACGCAGCCGTTGGCGCCCTGACCGGGGCGCCACTGGAGGCCGCCGCCGAGCGCGTAGCGACGACCTCGCTGAATGCGTTCCTGGCCCAGGTCGAACACCGCGCCTTCCGCCTGGCCGAAATGCAGCTGCGCCAGCGCGAGGACGCCATGGACGCGGTCCAGGACGCCATGTTGCGCCTGGCCCAGCACTACCGGGACAAGCCGCCGGAGGAATGGGCGCCCTTGTTCTGGGGCATCTTGCGCCGGCGCATCGTCGACCTGCAGCGCCGGCGCAAAGTGCGCTCGATCGTCGTCGGCTGGCTTGGCGGCGGCCAGGATGGCAATGGCGACGAACTCCCCGTATGGGAGCCCGCGGACCACGGGCCAGGGCCGCTCGACCAGCTTGGCGACGCCCAGGCCTATGCGGCGATGAGCGTCGCGGTGCGCAAGCTGCCACGGCGCCAGCGCGAGGCGTTCATGTTCCGCATCCTGGAAGGGCTGGACGTGGCCGACACGGCGCAGGCCATGCAGTGTTCCCAAGGCAGCGTCAAGACGCATCTGTCGCGCGCAATGCAACACCTGCGCGATCAACTGGAGGATTGGCGATGA
PROTEIN sequence
Length: 212
MESKHAADDDTDGNAVNAAVGALTGAPLEAAAERVATTSLNAFLAQVEHRAFRLAEMQLRQREDAMDAVQDAMLRLAQHYRDKPPEEWAPLFWGILRRRIVDLQRRRKVRSIVVGWLGGGQDGNGDELPVWEPADHGPGPLDQLGDAQAYAAMSVAVRKLPRRQREAFMFRILEGLDVADTAQAMQCSQGSVKTHLSRAMQHLRDQLEDWR*