ggKbase home page

scnpilot_solids2_trim150_scaffold_1876_3

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: comp(1961..2686)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, GntR family n=1 Tax=Methylobacterium extorquens DSM 13060 RepID=H1KNW7_METEX similarity UNIREF
DB: UNIREF100
  • Identity: 38.0
  • Coverage: 200.0
  • Bit_score: 119
  • Evalue 5.90e-24
GntR family transcriptional regulator {ECO:0000313|EMBL:KGJ05432.1}; TaxID=376733 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus halophilus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.5
  • Coverage: 217.0
  • Bit_score: 119
  • Evalue 4.90e-24
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 38.0
  • Coverage: 200.0
  • Bit_score: 118
  • Evalue 2.40e-24

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Paracoccus halophilus → Paracoccus → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 726
ATGCTGCCGAGCGAGGTACTGACAACGACCGGAATCAAGCGCTACACACTCACGGAGCAGATCGTTGAGTGGCTCTCTGCGCGCATCATCACCGGCGAGTACCCGCCAAACACGCCGTTGACCGAGGTCGATTTGGCCGAGACGTTGGGTTGCAGCCGCTCTCCGCTGCGTGAGGCCTTACGCGTCTTGGCGCAAGAGGGGCTGGTGGAACTAGTGCCCGGCAAGGGGGCGACGGTGAGTGCTTTTGAGCCGCGCCTGGCGGCGGAGCTCTACGACACACGGGCGCTGCTGGAGTCCGCGGCCGCGCGTTTGGCCGTGCCTGTCATTACGTTGGAGAAGATCGCTGGGTTGCGCAGTGTCCTGGCTGACCTAAGCGCTGCGGCGGCAAAGGGGGACGTCGCCAGCTATCATGACATCAACTGGCTGTTCCACACGGAGTTGTATAACCTCTGCCCGAACTCGACCATCGTCGACCTGGTGCGCCTAATCTGGCGCCGCACACTGCGCTACGGGTACTTGCTACGAAGCGACTCGCTGCGCCTGGCGGCGTCGGTGGCACGTAAGACTGCGTTGATGGCGGCTATCGAGGCTCGGGATGCTGGGGCGGCGGCCGAGTTGGTGGCGGCTATCGTCGTTAGTGGGAAGGGTGACGTGCTGGAGGCGCTTACTGAGGGTGCGGTGGATCCGTACGGGTATTGGGCGCGGAAGCGGGCCATGCCTTCTTGA
PROTEIN sequence
Length: 242
MLPSEVLTTTGIKRYTLTEQIVEWLSARIITGEYPPNTPLTEVDLAETLGCSRSPLREALRVLAQEGLVELVPGKGATVSAFEPRLAAELYDTRALLESAAARLAVPVITLEKIAGLRSVLADLSAAAAKGDVASYHDINWLFHTELYNLCPNSTIVDLVRLIWRRTLRYGYLLRSDSLRLAASVARKTALMAAIEARDAGAAAELVAAIVVSGKGDVLEALTEGAVDPYGYWARKRAMPS*