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scnpilot_solids2_trim150_scaffold_975_16

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: comp(16524..17069)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4W9X0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 97.8
  • Coverage: 181.0
  • Bit_score: 358
  • Evalue 3.30e-96
  • rbh
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:EIL96261.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.8
  • Coverage: 181.0
  • Bit_score: 358
  • Evalue 4.70e-96
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 92.8
  • Coverage: 181.0
  • Bit_score: 341
  • Evalue 1.30e-91

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 546
ATGTCGCCTGCCTCAGCGGGAGCCAACGACAGCGATGACGTGCGCGCGGCGGCCGCTGGCGACCGCCAGGCGTTCCAGCGGCTGTACCGGTTGCACGTGGGCCGCGTGCACGGCGCGGTATGCCGGCTCGCCGGCTACGACCATGCCCGCGCCGAAGACCTCACCCAGGACGCGTTCATCCGCGCCTGGCAGAAGCTGCCCGGCTTCCGTCACGAAAGCGCGTTCGGCACCTGGCTGTACCGGCTGGCGGTGAACGTCGCACTGATGGACATCCGCGCGCGCGGCGCCGACCCGGTCAGCACGCTCGACGACGAACATCTGCCGGATACCGGCCAGACCCCGTTCTGCGCCGCCGAGCGCGAGGAGCTGGAACGCGCCATCGCCCGACTGCCGCCGCGCGCCCGTGCCGTGCTGGTGCTGCACGACATCGAGGGCTGGCGGCACGAGGAAATCGGCGGCGAGCTGGGCATGGCCACCGGCACCTCGAAAGCGCAACTGCACCGCGCGCGCGGCCTGCTGCGCAAGATCCTGGGAGAAAGCTCATGA
PROTEIN sequence
Length: 182
MSPASAGANDSDDVRAAAAGDRQAFQRLYRLHVGRVHGAVCRLAGYDHARAEDLTQDAFIRAWQKLPGFRHESAFGTWLYRLAVNVALMDIRARGADPVSTLDDEHLPDTGQTPFCAAEREELERAIARLPPRARAVLVLHDIEGWRHEEIGGELGMATGTSKAQLHRARGLLRKILGESS*