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scnpilot_solids2_trim150_scaffold_975

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_975_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..271
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WG80_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL98471.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_975_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

652..1680
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WSV7_9GAMM
TonB family protein
TonB family protein {ECO:0000313|EMBL:AGG87766.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_975_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1753..3078)
DNA (1326bp) protein (442aa)
Beta-lactamase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WG82_9GAMM rbh
Beta-lactamase {ECO:0000313|EMBL:EIL98473.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
penicillin-binding protein, beta-lactamase class C rbh
scnpilot_solids2_trim150_scaffold_975_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3136..3723
DNA (588bp) protein (196aa)
LemA family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WG83_9GAMM
LemA family protein {ECO:0000313|EMBL:EIL98474.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_975_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3766..5658
DNA (1893bp) protein (631aa)
Peptidase M48 Ste24p n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WG84_9GAMM
Peptidase M48 Ste24p {ECO:0000313|EMBL:EIL98475.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Zn-dependent protease with chaperone function
scnpilot_solids2_trim150_scaffold_975_6
unknown

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comp(5586..5735)
DNA (150bp) protein (50aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_975_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5747..7345)
DNA (1599bp) protein (533aa)
Glucose-methanol-choline oxidoreductase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WG85_9GAMM rbh
Glucose-methanol-choline oxidoreductase {ECO:0000313|EMBL:EIL98476.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
choline dehydrogenase-like flavoprotein
scnpilot_solids2_trim150_scaffold_975_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7462..8724
DNA (1263bp) protein (421aa)
ATP/ADP translocase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WG86_9GAMM rbh
ATP/ADP translocase {ECO:0000313|EMBL:EIL98477.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
ATP/ADP translocase
scnpilot_solids2_trim150_scaffold_975_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8751..9179)
DNA (429bp) protein (143aa)
Signal transduction protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WG87_9GAMM
Signal transduction protein {ECO:0000313|EMBL:EIL98478.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative signal-transduction protein containing cAMP-binding and CBS domains
scnpilot_solids2_trim150_scaffold_975_10
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9278..10018)
DNA (741bp) protein (247aa)
Monofunctional biosynthetic peptidoglycan transglycosylase {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055690}; Short=Monofunctional TGase {ECO:0000256|HAMAP-Rule:MF_00766};; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00766, ECO:0000256|SAAS:SAAS00055699};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Monofunctional biosynthetic peptidoglycan transglycosylase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WG88_9GAMM rbh
monofunctional biosynthetic peptidoglycan transglycosylase rbh
scnpilot_solids2_trim150_scaffold_975_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10127..11026
DNA (900bp) protein (300aa)
Disulfide bond chaperone n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WG89_9GAMM rbh
33 kDa chaperonin {ECO:0000256|SAAS:SAAS00038673}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
disulfide bond chaperone
scnpilot_solids2_trim150_scaffold_975_12
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11045..13945)
DNA (2901bp) protein (967aa)
Diguanylate cyclase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WG90_9GAMM rbh
Diguanylate cyclase {ECO:0000313|EMBL:EIL98481.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
diguanylate cyclase (GGDEF) domain-containing protein
scnpilot_solids2_trim150_scaffold_975_13
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14182..15090
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WG91_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL98482.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_975_14
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15161..16063)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WG92_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL98483.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_975_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16081..16527)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NE49_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG87778.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids2_trim150_scaffold_975_16
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16524..17069)
DNA (546bp) protein (182aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4W9X0_9GAMM rbh
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:EIL96261.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
RNA polymerase sigma factor, sigma-70 family
scnpilot_solids2_trim150_scaffold_975_17
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17201..18985)
DNA (1785bp) protein (595aa)
Phosphoenolpyruvate carboxykinase [GTP] {ECO:0000256|HAMAP-Rule:MF_00452, ECO:0000256|SAAS:SAAS00222031}; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00452};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00452};; EC=4.1.1.32 {ECO:0000256|HAMAP-Rule:MF_00452};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Phosphoenolpyruvate carboxykinase [GTP] n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4W9X1_9GAMM rbh
phosphoenolpyruvate carboxykinase (GTP) rbh
scnpilot_solids2_trim150_scaffold_975_18
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19113..19691)
DNA (579bp) protein (193aa)
Transcriptional regulator n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4W9X2_9GAMM rbh
Transcriptional regulator {ECO:0000313|EMBL:EIL96263.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
transcriptional regulator
scnpilot_solids2_trim150_scaffold_975_19
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19831..20754
DNA (924bp) protein (308aa)
Hydrolase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4W9X3_9GAMM rbh
Hydrolase {ECO:0000313|EMBL:EIL96264.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative hydrolase or acyltransferase of alpha/beta superfamily
scnpilot_solids2_trim150_scaffold_975_20
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20745..22172
DNA (1428bp) protein (476aa)
Acyl-CoA dehydrogenase n=2 Tax=Rhodanobacter RepID=I4WSU0_9GAMM
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AGG87783.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 20 items

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