ggKbase home page

scnpilot_solids2_trim150_scaffold_4920_3

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: comp(3446..4237)

Top 3 Functional Annotations

Value Algorithm Source
Protein CBR-CLEC-223 n=1 Tax=Caenorhabditis briggsae RepID=A8Y4K4_CAEBR similarity UNIREF
DB: UNIREF100
  • Identity: 34.2
  • Coverage: 161.0
  • Bit_score: 74
  • Evalue 2.40e-10
Protein CBR-CLEC-223 {ECO:0000313|EMBL:CAP39824.2}; TaxID=6238 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis.;" source="Caenorhabditis briggsae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.2
  • Coverage: 161.0
  • Bit_score: 74
  • Evalue 3.30e-10
ubiquitin thiolesterase similarity KEGG
DB: KEGG
  • Identity: 30.4
  • Coverage: 194.0
  • Bit_score: 71
  • Evalue 4.90e-10

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Caenorhabditis briggsae → Caenorhabditis → Rhabditida → Chromadorea → Nematoda → Metazoa

Sequences

DNA sequence
Length: 792
ATGCCCCAATCAGCGTTCCAACCGCGTGCACCTCGAATTGGCAAGATGGACCTCGCAGATGCGTCTGGTGTTGTAACCTTCTACCTCTCATTCACAGAGGCCGGCGCATTTGTCGTGGTCCTCACAGGGGAGGTCACCGGCGCGATTCAAACTAGGGTGACTGTTGTTGACGAGAATCGACTGCCGAGTTCGAACACCACGCCAACGCCTGTCTCCAGTGCTGTTCCGCAGCTGACTGGGGCACCCTCTTCCGTTGAAGCCACGCCAGCGAGCATTACCGCGTCGCAGCCCCCGGAAACTATTCGATCGACGCAACCTTCGCCAGTTATCAACACCAGCAGTAAGGCGACAGAGCAAAGCTCGCCGGCGGAGAATCCACCACATAGCGCGACGCCGACGAACGATCCGGCGACGACTACGTCCGATCTACCTGCTCCGTCGAGTTCATCAGCTCATGAAACAACTACATTCTCCGAATCGAGCAGCACCACGACCGAGTCGGCACAGGAGTCCACCAGTACGTCGGAATCCTCGGAGGCAACCAGAGTACGTCGGAGACGAGCAGCCAGTCCACCAGTACGTCGGCACAGGAGTCCACTTCTGTATCGGACACTTCAAGCACCACGACCGAGTCGAGCCAGGAGGCAACCAGCGCTTCGGAGACGACTGGAACGACGGAGGAATTTGATCCGACAGCACCACAGGCATGCGATGCAGTCCCGGATCGGGCTCCCTTTTCAAACCTCTGCGGATGGTTGCCGGCAGGCGCGGCAGGCGTTTCTATCGTCGTAG
PROTEIN sequence
Length: 264
MPQSAFQPRAPRIGKMDLADASGVVTFYLSFTEAGAFVVVLTGEVTGAIQTRVTVVDENRLPSSNTTPTPVSSAVPQLTGAPSSVEATPASITASQPPETIRSTQPSPVINTSSKATEQSSPAENPPHSATPTNDPATTTSDLPAPSSSSAHETTTFSESSSTTTESAQESTSTSESSEATRVRRRRAASPPVRRHRSPLLYRTLQAPRPSRARRQPALRRRLERRRNLIRQHHRHAMQSRIGLPFQTSADGCRQARQAFLSS*