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scnpilot_solids2_trim150_scaffold_4920

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_4920_1
unknown

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1..264
DNA (264bp) protein (88aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_4920_2
unknown

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366..2951
DNA (2586bp) protein (862aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_4920_3
Caenorhabditis briggsae, Caenorhabditis, Rhabditida, Chromadorea, Nematoda, Metazoa

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comp(3446..4237)
DNA (792bp) protein (264aa)
Protein CBR-CLEC-223 n=1 Tax=Caenorhabditis briggsae RepID=A8Y4K4_CAEBR
Protein CBR-CLEC-223 {ECO:0000313|EMBL:CAP39824.2}; TaxID=6238 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis.;" source="Caenorhabditis briggsae.;"
ubiquitin thiolesterase
scnpilot_solids2_trim150_scaffold_4920_4
Acinetobacter lwoffii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4884..5387)
DNA (504bp) protein (168aa)
Integrase core domain protein (Fragment) n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SZF8_ACILW
Integrase core domain protein {ECO:0000313|EMBL:EEY88736.1}; Flags: Fragment;; TaxID=575588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter lwoffii SH145.;"
transposase
scnpilot_solids2_trim150_scaffold_4920_5
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

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comp(5404..6864)
DNA (1461bp) protein (487aa)
Putative RNA-directed DNA polymerase {ECO:0000313|EMBL:CCM65197.1}; EC=2.7.7.49 {ECO:0000313|EMBL:CCM65197.1};; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
RNA-directed DNA polymerase (EC:2.7.7.49); K00986 RNA-directed DNA polymerase [EC:2.7.7.49]
Putative RNA-directed DNA polymerase n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z795_9ACTN rbh
scnpilot_solids2_trim150_scaffold_4920_6
Knoellia aerolata, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(7343..7846)
DNA (504bp) protein (168aa)
Transposase IS401 n=1 Tax=Agrococcus pavilionensis RW1 RepID=U1MLW6_9MICO
Integrase {ECO:0000313|EMBL:KGN35085.1}; Flags: Fragment;; TaxID=1385519 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia aerolata DSM 18566.;"
putative transposase
scnpilot_solids2_trim150_scaffold_4920_7
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(7846..8127)
DNA (282bp) protein (94aa)
Transposase IS3/IS911 family protein n=1 Tax=Segniliparus rotundus (strain ATCC BAA-972 / CDC 1076 / CIP 108378 / DSM 44985 / JCM 13578) RepID=D6ZAT7_SEGRD
Uncharacterized protein {ECO:0000313|EMBL:CDK00390.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
transposase IS3/IS911 family protein
scnpilot_solids2_trim150_scaffold_4920_8
unknown

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8747..9334
DNA (588bp) protein (196aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_4920_9
Bifidobacterium boum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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9377..10126
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Bifidobacterium thermophilum RBL67 RepID=M4RAT3_9BIFI
Excalibur domain containing protein {ECO:0000313|EMBL:KFI47361.1}; TaxID=78343 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium boum.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_4920_10
unknown

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10123..10299
DNA (177bp) protein (59aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_4920_11
unknown

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10399..10785
DNA (387bp) protein (129aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_4920_12
Gammaproteobacteria bacterium MFB021, Gammaproteobacteria, Proteobacteria, Bacteria

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10836..11144
DNA (309bp) protein (103aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215290};; TaxID=1492922 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium MFB021.;"
Thymidylate synthase n=1 Tax=Klebsiella oxytoca 10-5245 RepID=H3MA05_KLEOX
thymidylate synthase
Displaying 12 items

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