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scnpilot_solids2_trim150_scaffold_3339_8

Organism: SCNPILOT_SOLID2_TRIM150_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 16 / 38 MC: 16
Location: comp(6810..7151)

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein TrbC n=2 Tax=Afipia RepID=D6V0X3_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 95.6
  • Coverage: 113.0
  • Bit_score: 201
  • Evalue 4.30e-49
Conjugal transfer protein TrbC {ECO:0000313|EMBL:EFI53353.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.6
  • Coverage: 113.0
  • Bit_score: 201
  • Evalue 6.00e-49
conjugal transfer protein Trbc; K03197 type IV secretion system protein VirB2 similarity KEGG
DB: KEGG
  • Identity: 86.7
  • Coverage: 113.0
  • Bit_score: 188
  • Evalue 9.00e-46

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 342
ATGAACCGCGTTCTCGCCGTCGCTCATTCTTCGCGTCGCCGCCTGGCCGAGCTCGTCACGCTCGCCACTCTTACGCTCGCCTTCGCCCCGGCGGCTTACGCCTCGGGCTCCTCGATGCCTTGGGAGACCCCGCTCAACTCCATCCTGGAGTCTGTGCAAGGGCCTGTCGCCAAGATCATCTCGGTAATCATCATCACGGTCACCGGCCTGACGCTCGCCTTTGGCGACACCTCGGGCGGCTTTCGCCGGCTGATCCAGATCGTGTTCGGCCTGTCGATCGCCTTCGCCGCGTCGAGCTTCTTTCTGTCCTTCTTCTCGTTCTCCGGCGGGGCGCTGGTCTGA
PROTEIN sequence
Length: 114
MNRVLAVAHSSRRRLAELVTLATLTLAFAPAAYASGSSMPWETPLNSILESVQGPVAKIISVIIITVTGLTLAFGDTSGGFRRLIQIVFGLSIAFAASSFFLSFFSFSGGALV*