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scnpilot_solids2_trim150_scaffold_3339

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_3339_1
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..980)
DNA (978bp) protein (326aa)
P-type conjugative transfer protein TrbG n=2 Tax=Afipia RepID=D6V0W5_9BRAD
P-type conjugative transfer protein TrbG {ECO:0000313|EMBL:EFI53345.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
P-type conjugative transfer protein TrbG; K03204 type IV secretion system protein VirB9
scnpilot_solids2_trim150_scaffold_3339_2
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(977..1666)
DNA (690bp) protein (230aa)
Conjugal transfer protein n=2 Tax=Afipia RepID=D6V0W6_9BRAD
Conjugal transfer protein {ECO:0000313|EMBL:EFI53346.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
conjugal transfer protein TrbF; K03200 type IV secretion system protein VirB5
scnpilot_solids2_trim150_scaffold_3339_3
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1670..3022)
DNA (1353bp) protein (451aa)
P-type conjugative transfer protein TrbL n=2 Tax=Afipia RepID=K8NPW3_AFIFE
P-type conjugative transfer protein TrbL {ECO:0000313|EMBL:EKS30464.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
conjugal transfer protein TrbL; K07344 type IV secretion system protein TrbL
scnpilot_solids2_trim150_scaffold_3339_4
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3019..3345)
DNA (327bp) protein (109aa)
Uncharacterized protein n=2 Tax=Afipia RepID=D6V0W9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS30463.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_3339_5
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3355..4092)
DNA (738bp) protein (246aa)
P-type conjugative transfer protein TrbJ n=2 Tax=Afipia RepID=D6V0X0_9BRAD rbh
P-type conjugative transfer protein TrbJ {ECO:0000313|EMBL:EKS30462.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
conjugal transfer protein TrbJ rbh
scnpilot_solids2_trim150_scaffold_3339_6
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4089..6527)
DNA (2439bp) protein (813aa)
AAA ATPase n=2 Tax=Afipia RepID=D6V0X1_9BRAD rbh
VirB4 family type IV secretion/conjugal transfer ATPase {ECO:0000313|EMBL:EKS30461.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
conjugal transfer ATPase TrbE; K03199 type IV secretion system protein VirB4
scnpilot_solids2_trim150_scaffold_3339_7
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6535..6810)
DNA (276bp) protein (92aa)
Type IV secretory pathway VirB3 family protein n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=B5ZHT0_GLUDA
type IV secretory pathway VirB3 family protein; K03198 type IV secretion system protein VirB3
Type IV secretory pathway VirB3 family protein {ECO:0000313|EMBL:ACI52558.1}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
scnpilot_solids2_trim150_scaffold_3339_8
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6810..7151)
DNA (342bp) protein (114aa)
Conjugal transfer protein TrbC n=2 Tax=Afipia RepID=D6V0X3_9BRAD
Conjugal transfer protein TrbC {ECO:0000313|EMBL:EFI53353.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
conjugal transfer protein Trbc; K03197 type IV secretion system protein VirB2
scnpilot_solids2_trim150_scaffold_3339_9
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7148..7963)
DNA (816bp) protein (272aa)
P-type conjugative transfer ATPase TrbB n=2 Tax=Afipia RepID=D6V0X4_9BRAD
P-type conjugative transfer ATPase TrbB {ECO:0000313|EMBL:EFI53354.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
trbB; conjugal transfer protein; K03196 type IV secretion system protein VirB11
scnpilot_solids2_trim150_scaffold_3339_10
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8318..9187)
DNA (870bp) protein (290aa)
Uncharacterized protein n=2 Tax=Afipia RepID=D6V0X5_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS30457.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_3339_11
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9192..9782)
DNA (591bp) protein (197aa)
Uncharacterized protein n=2 Tax=Afipia RepID=D6V0X6_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS30456.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_3339_12
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9883..10254)
DNA (372bp) protein (124aa)
Uncharacterized protein n=2 Tax=Afipia RepID=D6V0X7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EFI53357.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
hypothetical protein
Displaying 12 items

View Taxonomy