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scnpilot_solids2_trim150_scaffold_3

Search features with annotation key words

Displaying items 1-30 of 558 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_3_1
unknown

Not on your lists

comp(2..97)
DNA (96bp) protein (32aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_3_2
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(171..1178)
DNA (1008bp) protein (336aa)
TRAP dicarboxylate transporter, DctP subunit n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GQ24_PUSST
TRAP dicarboxylate transporter subunit DctP; K11688 C4-dicarboxylate-binding protein DctP
TRAP dicarboxylate transporter, DctP subunit {ECO:0000313|EMBL:AEC19347.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (strain T7-7).;"
scnpilot_solids2_trim150_scaffold_3_3
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1328..1765)
DNA (438bp) protein (146aa)
Hemerythrin HHE cation binding domain protein 3 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HLC4_ACHXA
hemerythrin HHE cation binding domain-containing protein 3
Hemerythrin HHE cation binding domain protein 3 {ECO:0000313|EMBL:ADP18125.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans (strain A8).;"
scnpilot_solids2_trim150_scaffold_3_4
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1948..2724
DNA (777bp) protein (259aa)
ABC transporter ATP-binding protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00031B4D21 rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDM24683.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
ABC transporter ATP-binding protein; K02049 NitT/TauT family transport system ATP-binding protein rbh
scnpilot_solids2_trim150_scaffold_3_5
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2721..3719
DNA (999bp) protein (333aa)
ABC transporter substrate-binding protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002F47EFE rbh
Hydroxymethylpyrimidine ABC transporter, substrate-binding component {ECO:0000313|EMBL:CDM24682.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
hypothetical protein; K02051 NitT/TauT family transport system substrate-binding protein rbh
scnpilot_solids2_trim150_scaffold_3_6
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3795..4568
DNA (774bp) protein (258aa)
Putative permease of ABC transporter n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GQ35_PUSST rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDM24681.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
ABC transporter permease; K02050 NitT/TauT family transport system permease protein rbh
scnpilot_solids2_trim150_scaffold_3_7
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4561..5352
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002F17E18
Putative substrate-binding protein {ECO:0000313|EMBL:CDM24680.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
ABC transporter periplasmic protein
scnpilot_solids2_trim150_scaffold_3_8
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5391..5654)
DNA (264bp) protein (88aa)
Translation initiation factor IF-1 n=1 Tax=Advenella kashmirensis (strain DSM 17095 / LMG 22695 / WT001) RepID=I3UCX1_ADVKW
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
infA; translation initiation factor IF-1
scnpilot_solids2_trim150_scaffold_3_9
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5947..6855
DNA (909bp) protein (303aa)
Permease of the drug/metabolite transporter superfamily {ECO:0000313|EMBL:CDM24678.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
hypothetical protein id=12553113 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
scnpilot_solids2_trim150_scaffold_3_10
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6852..7772
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GQ42_PUSST
Permease of the drug/metabolite transporter superfamily {ECO:0000313|EMBL:CDM24677.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_3_11
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7829..9529)
DNA (1701bp) protein (567aa)
single-stranded-DNA-specific exonuclease; K07462 single-stranded-DNA-specific exonuclease [EC:3.1.-.-] rbh
Single-stranded-DNA-specific exonuclease n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GQ43_PUSST rbh
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:CDM24676.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
scnpilot_solids2_trim150_scaffold_3_12
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9514..10425)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GQ44_PUSST
Uncharacterized protein {ECO:0000313|EMBL:CDM24675.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_3_13
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10466..11737
DNA (1272bp) protein (424aa)
Lipoprotein releasing system, transmembrane protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GQ45_PUSST rbh
Lipoprotein releasing system transmembrane protein LolC {ECO:0000313|EMBL:CDM24674.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
lipoprotein releasing system, transmembrane protein; K09808 lipoprotein-releasing system permease protein rbh
scnpilot_solids2_trim150_scaffold_3_14
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11730..12428
DNA (699bp) protein (233aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00030DA6B8 rbh
lolD; lipoprotein releasing system ATP-binding protein rbh
scnpilot_solids2_trim150_scaffold_3_15
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12477..13307
DNA (831bp) protein (277aa)
Mg-dependent DNase; K03424 TatD DNase family protein [EC:3.1.21.-] rbh
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002DEE847 rbh
Putative deoxyribonuclease {ECO:0000313|EMBL:CDM24672.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
scnpilot_solids2_trim150_scaffold_3_16
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13455..14330
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00038298A9 rbh
endo-1,4-beta-xylanase Z
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_solids2_trim150_scaffold_3_17
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14464..17184
DNA (2721bp) protein (907aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002E6647A rbh
DNA internalization competence protein ComEC/Rec2 {ECO:0000313|EMBL:CDM24670.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
ComEC/Rec2; K02238 competence protein ComEC rbh
scnpilot_solids2_trim150_scaffold_3_18
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17299..18531
DNA (1233bp) protein (411aa)
Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit {ECO:0000313|EMBL:CDM24669.1}; EC=1.2.4.4 {ECO:0000313|EMBL:CDM24669.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
3-methyl-2-oxobutanoate dehydrogenase; K00166 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [EC:1.2.4.4] rbh
3-methyl-2-oxobutanoate dehydrogenase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GQ53_PUSST rbh
scnpilot_solids2_trim150_scaffold_3_19
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18528..19571
DNA (1044bp) protein (348aa)
Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit {ECO:0000313|EMBL:CDM24668.1}; EC=1.2.4.4 {ECO:0000313|EMBL:CDM24668.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
transketolase; K00167 2-oxoisovalerate dehydrogenase E1 component, beta subunit [EC:1.2.4.4] rbh
Transketolase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GQ54_PUSST rbh
scnpilot_solids2_trim150_scaffold_3_20
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19571..20965
DNA (1395bp) protein (465aa)
Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex {ECO:0000313|EMBL:CDM24667.1}; EC=2.3.1.168 {ECO:0000313|EMBL:CDM24667.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC:2.3.1.168) rbh
Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex n=2 Tax=Alcaligenes xylosoxydans xylosoxydans RepID=R4XTJ4_ALCXX rbh
scnpilot_solids2_trim150_scaffold_3_21
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20968..22380
DNA (1413bp) protein (471aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692, ECO:0000313|EMBL:CDM24666.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
dihydrolipoamide dehydrogenase; K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4] rbh
Dihydrolipoyl dehydrogenase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GQ56_PUSST rbh
scnpilot_solids2_trim150_scaffold_3_22
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22472..23416
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GQ57_PUSST rbh
Probable hydrolase {ECO:0000313|EMBL:CDM24665.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_3_23
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23457..24311
DNA (855bp) protein (285aa)
PHP domain protein n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4XER9_9BURK rbh
Predicted metal-dependent phosphoesterases {ECO:0000313|EMBL:CDM24664.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
hypothetical protein; K07053
scnpilot_solids2_trim150_scaffold_3_24
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24308..24868
DNA (561bp) protein (187aa)
Transcription elongation factor GreB n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HQ11_ACHXA rbh
Transcription elongation factor GreB {ECO:0000256|HAMAP-Rule:MF_00930, ECO:0000313|EMBL:CDM24663.1}; Transcript cleavage factor GreB {ECO:0000256|HAMAP-Rule:MF_00930}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
greB; transcription elongation factor GreB; K04760 transcription elongation factor GreB rbh
scnpilot_solids2_trim150_scaffold_3_25
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25025..29071
DNA (4047bp) protein (1349aa)
Phosphoribosylformylglycinamidine synthase {ECO:0000256|HAMAP-Rule:MF_00419, ECO:0000256|SAAS:SAAS00064474}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00419};; Short=FGAMS {ECO:0000256|HAMAP-Rule:MF_00419};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00419, ECO:0000256|SAAS:SAAS00064474};; Formylglycinamide ribonucleotide amidotransferase {ECO:0000256|HAMAP-Rule:MF_00419}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castella
Phosphoribosylformylglycinamidine synthase,synthetase subunit / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC:6.3.5.3) rbh
phosphoribosylformylglycinamidine synthase n=1 Tax=Pusillimonas noertemannii RepID=UPI00031FFE20 rbh
scnpilot_solids2_trim150_scaffold_3_26
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29154..31484)
DNA (2331bp) protein (777aa)
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:CDM22588.1}; EC=1.3.8.1 {ECO:0000313|EMBL:CDM22588.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
Butyryl-CoA dehydrogenase (EC:1.3.8.1) rbh
Acyl-CoA dehydrogenase n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0FF57_9BURK rbh
scnpilot_solids2_trim150_scaffold_3_27
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31603..32682)
DNA (1080bp) protein (360aa)
ABC transporter n=1 Tax=Achromobacter piechaudii HLE RepID=J4YE73_9BURK rbh
Lipase {ECO:0000313|EMBL:KGY28128.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans).;"
cell processes; transport of small molecules rbh
scnpilot_solids2_trim150_scaffold_3_28
Bordetella sp. 8-296-03, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32675..34444)
DNA (1770bp) protein (590aa)
Binding-protein-dependent transport system inner membrane component family protein 7 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HE63_ACHXA rbh
ABC transporter, permease protein {ECO:0000313|EMBL:KCB35229.1}; TaxID=1331258 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 8-296-03.;"
binding-protein-dependent transporter inner membrane component family protein 7; K02011 iron(III) transport system permease protein rbh
scnpilot_solids2_trim150_scaffold_3_29
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34526..35626)
DNA (1101bp) protein (367aa)
Extracellular solute-binding family protein n=1 Tax=Achromobacter piechaudii HLE RepID=J4Y6Q6_9BURK rbh
Iron ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGD93619.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. RTa.;"
Putative ABC transporter, periplasmmic iron binding protein precursor rbh
scnpilot_solids2_trim150_scaffold_3_30
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35706..38216)
DNA (2511bp) protein (837aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 5132.;"
HAMP domain-containing protein 2; K07649 two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] rbh
HAMP domain protein 2 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HE65_ACHXA rbh
Displaying items 1-30 of 558 in total

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