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scnpilot_solids2_trim150_scaffold_251

Search features with annotation key words

Displaying items 1-30 of 94 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_251_1
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..117)
DNA (117bp) protein (39aa)
Integrase catalytic region n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GW01_PUSST
integrase catalytic region
Integrase catalytic region {ECO:0000313|EMBL:AEC18833.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (strain T7-7).;"
scnpilot_solids2_trim150_scaffold_251_2
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

307..726
DNA (420bp) protein (140aa)
osmotically inducible protein C n=1 Tax=Methyloversatilis sp. NVD RepID=UPI000366F3A4
OsmC family protein
Tax=BJP_IG2103_Rhodocyclales_63_50
scnpilot_solids2_trim150_scaffold_251_3
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(710..1366)
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI00037BC544
Tax=CG_Rhodof_02
scnpilot_solids2_trim150_scaffold_251_trna_2
unknown

Not on your lists

comp(1698..1770)
DNA (73bp)
transferRNA Asn
scnpilot_solids2_trim150_scaffold_251_4
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2025..3131
DNA (1107bp) protein (369aa)
O-actetyltransferase n=4 Tax=Salmonella choleraesuis RepID=S5RR42_SALCE
O-actetyltransferase {ECO:0000313|EMBL:AGS07333.1}; TaxID=28901 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella choleraesuis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_251_5
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3162..3545)
DNA (384bp) protein (128aa)
S4 domain protein n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4XFP8_9BURK
S4 domain protein {ECO:0000313|EMBL:EFF74340.1}; TaxID=742159 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter piechaudii ATCC 43553.;"
Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog
scnpilot_solids2_trim150_scaffold_251_6
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3583..4329)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9HXV6_BORPD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CDM25620.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
scnpilot_solids2_trim150_scaffold_251_7
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4326..4697)
DNA (372bp) protein (124aa)
Putative DNA-binding protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9HXV8_BORPD
Uncharacterized protein {ECO:0000313|EMBL:CDM25619.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
DNA-binding protein
scnpilot_solids2_trim150_scaffold_251_8
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4834..5094
DNA (261bp) protein (87aa)
Uncharacterized protein n=2 Tax=Burkholderiaceae RepID=Q0K144_CUPNH
hypothetical protein; K09981 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ96280.1}; TaxID=381666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337); (Ralstonia eutropha).;"
scnpilot_solids2_trim150_scaffold_251_9
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5155..5727
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Bordetella bronchiseptica (strain MO149) RepID=K0MZ01_BORBM
Uncharacterized protein {ECO:0000313|EMBL:CDM24881.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_251_10
unknown

Not on your lists

5934..6161
DNA (228bp) protein (76aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_251_11
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6277..7506
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Pseudomonas pseudoalcaligenes KF707 RepID=L8ME52_PSEPS rbh
Uncharacterized protein {ECO:0000313|EMBL:CDM24883.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_251_12
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7529..8641
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GWQ1_PUSST rbh
Membrane protein, putative {ECO:0000313|EMBL:CDM24884.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_251_13
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8672..9136)
DNA (465bp) protein (155aa)
Uncharacterized protein n=5 Tax=Bordetella RepID=F4LHJ3_BORPC
Uncharacterized protein {ECO:0000313|EMBL:CDM24885.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_251_trna_1
unknown

Not on your lists

9138..9210
DNA (73bp)
transferRNA Thr
scnpilot_solids2_trim150_scaffold_251_14
unknown

Not on your lists

comp(9327..9470)
DNA (144bp) protein (48aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_251_15
unknown

Not on your lists

9543..9668
DNA (126bp) protein (42aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_251_16
Kangiella geojedonensis, Kangiella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9807..10142
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Vibrio ordalii RepID=UPI00031A2376
Uncharacterized protein {ECO:0000313|EMBL:AKE51636.1}; TaxID=914150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Kangiella.;" source="Kangiella geojedonensis.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_251_17
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11373..11966
DNA (594bp) protein (198aa)
Cytochrome b/b6 domain protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WTZ4_9GAMM
Cytochrome b/b6 domain protein {ECO:0000313|EMBL:EIM02936.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
cytochrome b/b6 domain-containing protein; K12262 cytochrome b561
scnpilot_solids2_trim150_scaffold_251_18
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11939..12355)
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI000365F356
Uncharacterized protein {ECO:0000313|EMBL:EHP44527.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis OR16.;"
hypothetical protein; K07112
scnpilot_solids2_trim150_scaffold_251_19
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12366..12797)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Cupriavidus basilensis OR16 RepID=H1RYZ5_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EHP44526.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis OR16.;"
hypothetical protein; K07112
scnpilot_solids2_trim150_scaffold_251_20
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12790..13116)
DNA (327bp) protein (109aa)
Regulatory protein ArsR n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0QBV3_ACIAP
regulatory protein ArsR
Regulatory protein ArsR {ECO:0000313|EMBL:ADX48569.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
scnpilot_solids2_trim150_scaffold_251_21
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13213..14133
DNA (921bp) protein (307aa)
beta-lactamase n=1 Tax=Variovorax paradoxus RepID=UPI00037759DA rbh
metallo-beta-lactamase superfamily protein rbh
Metallo-beta-lactamase superfamily protein {ECO:0000313|EMBL:AGU52943.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
scnpilot_solids2_trim150_scaffold_251_22
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14194..14358)
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IRY3_BORPD
Uncharacterized protein {ECO:0000313|EMBL:CDM24119.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_251_23
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14430..15512)
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GRP4_PUSST rbh
Uncharacterized protein {ECO:0000313|EMBL:CDM24118.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
hypothetical protein; K07112 rbh
scnpilot_solids2_trim150_scaffold_251_24
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15528..16469)
DNA (942bp) protein (314aa)
thiosulfate sulfurtransferase (EC:2.8.1.1); K01011 thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] rbh
Putative thiosulfate sulfurtransferase n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IRY8_BORPD rbh
Sulfurtransferase {ECO:0000313|EMBL:CDM24117.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
scnpilot_solids2_trim150_scaffold_251_25
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16621..17520)
DNA (900bp) protein (300aa)
Ribokinase {ECO:0000313|EMBL:CDM24116.1}; EC=2.7.1.15 {ECO:0000313|EMBL:CDM24116.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
Ribokinase n=1 Tax=Alcaligenes faecalis subsp. faecalis NCIB 8687 RepID=J0UXZ1_ALCFA
PfkB domain-containing protein
scnpilot_solids2_trim150_scaffold_251_26
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17635..18900
DNA (1266bp) protein (422aa)
MFS transporter n=1 Tax=Pusillimonas noertemannii RepID=UPI00036F60BD rbh
MFS permease {ECO:0000313|EMBL:CDM24113.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
MFS permease; K08156 MFS transporter, DHA1 family, arabinose polymer transporter rbh
scnpilot_solids2_trim150_scaffold_251_27
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18919..19767)
DNA (849bp) protein (283aa)
Glutathione S-transferase {ECO:0000313|EMBL:CDM24112.1}; EC=2.5.1.18 {ECO:0000313|EMBL:CDM24112.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
Glutathione S-transferase n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2IJ68_9BURK
glutathione S-transferase YghU; K11209 GST-like protein
scnpilot_solids2_trim150_scaffold_251_28
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19861..20079)
DNA (219bp) protein (73aa)
SlyX family protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T9Q7_ACIDE
SlyX family protein {ECO:0000313|EMBL:CDM24110.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
hypothetical protein
Displaying items 1-30 of 94 in total

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