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scnpilot_solids2_trim150_scaffold_3115

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_3115_1
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1..684)
DNA (684bp) protein (228aa)
CBS domain containing protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PL89_CHIPD
Uncharacterized protein {ECO:0000313|EMBL:GAO41835.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_3115_2
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1032..2105)
DNA (1074bp) protein (358aa)
A/G-specific adenine glycosylase; K03575 A/G-specific adenine glycosylase [EC:3.2.2.-]
A/G-specific adenine glycosylase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PL91_CHIPD
Adenine glycosylase {ECO:0000313|EMBL:KIC89711.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
scnpilot_solids2_trim150_scaffold_3115_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2269..2568
DNA (300bp) protein (100aa)
Histone family protein DNA-binding protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNT8_NIAKG
histone family protein DNA-binding protein; K03530 DNA-binding protein HU-beta
Histone family protein DNA-binding protein {ECO:0000313|EMBL:AEW02023.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_3115_4
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2605..3462
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNT9_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:GAO41839.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_3115_5
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3703..5250
DNA (1548bp) protein (516aa)
ribonuclease, Rne/Rng family; K08301 ribonuclease G [EC:3.1.26.-]
Ribonuclease, Rne/Rng family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNU1_NIAKG
Ribonuclease {ECO:0000313|EMBL:GAO41840.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
scnpilot_solids2_trim150_scaffold_3115_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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5411..6643
DNA (1233bp) protein (411aa)
DNA polymerase III gamma/tau subunits-like protein; K02341 DNA polymerase III subunit delta' [EC:2.7.7.7]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000379E6D0
DNA polymerase III gamma/tau subunits-like protein {ECO:0000313|EMBL:AEW02032.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_3115_7
unknown

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6738..6845
DNA (108bp) protein (36aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_3115_8
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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6848..8122
DNA (1275bp) protein (425aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000382E1ED
Uncharacterized protein {ECO:0000313|EMBL:KIC96046.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
PSP1 domain-containing protein
scnpilot_solids2_trim150_scaffold_3115_9
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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8160..9038
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000374B0BA
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:GAO42889.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
gliding motility protein GldA; K09687 antibiotic transport system ATP-binding protein
scnpilot_solids2_trim150_scaffold_3115_10
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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9035..10327
DNA (1293bp) protein (431aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
enolase; K01689 enolase [EC:4.2.1.11]
Enolase n=1 Tax=Niabella soli DSM 19437 RepID=H1NTC9_9SPHI
scnpilot_solids2_trim150_scaffold_3115_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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10395..10652
DNA (258bp) protein (86aa)
Septum formation initiator n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIM4_NIAKG
septum formation initiator
Septum formation initiator {ECO:0000313|EMBL:AEW02877.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_3115_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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10736..10972
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIM3_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02876.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying 12 items

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