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scnpilot_solids2_trim150_scaffold_2867

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_2867_1
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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1..705
DNA (705bp) protein (235aa)
Methylisocitrate lyase {ECO:0000256|RuleBase:RU361121}; EC=4.1.3.30 {ECO:0000256|RuleBase:RU361121};; TaxID=1216967 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535.;"
methylisocitrate lyase; K03417 methylisocitrate lyase [EC:4.1.3.30]
2-methylisocitrate lyase n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CJ89_ELIME
scnpilot_solids2_trim150_scaffold_2867_2
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

695..1861
DNA (1167bp) protein (389aa)
2-methylcitrate synthase/citrate synthase II (EC:2.3.3.5); K01659 2-methylcitrate synthase [EC:2.3.3.5]
Citrate synthase n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CIB0_ELIME rbh
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
scnpilot_solids2_trim150_scaffold_2867_3
Elizabethkingia sp. BM10, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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1884..3335
DNA (1452bp) protein (484aa)
2-methylcitrate dehydratase {ECO:0000313|EMBL:AJW65007.1}; EC=4.2.1.79 {ECO:0000313|EMBL:AJW65007.1};; TaxID=722877 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia sp. BM10.;"
2-methylcitrate dehydratase n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CIH5_ELIME rbh
2-methylcitrate dehydratase
scnpilot_solids2_trim150_scaffold_2867_4
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3381..4313)
DNA (933bp) protein (311aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003609ACF rbh
PA-phosphatase-like phosphoesterase rbh
Phosphoesterase PA-phosphatase related protein {ECO:0000313|EMBL:EHQ30245.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
scnpilot_solids2_trim150_scaffold_2867_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4318..4971)
DNA (654bp) protein (218aa)
Fatty acid hydroxylase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TLR5_NIAKG
fatty acid hydroxylase
Fatty acid hydroxylase {ECO:0000313|EMBL:AEV97657.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_2867_6
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(5082..5645)
DNA (564bp) protein (188aa)
CDP-alcohol phosphatidyltransferase n=1 Tax=Spirosoma luteum RepID=UPI000377F1D9
CDP-alcohol phosphatidyltransferase
CDP-alcohol phosphatidyltransferase {ECO:0000313|EMBL:ADB37575.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
scnpilot_solids2_trim150_scaffold_2867_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5642..6349)
DNA (708bp) protein (236aa)
CDP-alcohol phosphatidyltransferase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] rbh
CDP-diacylglycerol-inositol 3-phosphatidyltransferase n=1 Tax=Segetibacter koreensis RepID=UPI0003683B71 rbh
CDP-alcohol phosphatidyltransferase {ECO:0000313|EMBL:AEV97659.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_2867_8
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(6378..6941)
DNA (564bp) protein (188aa)
membrane protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037689D6
Membrane protein {ECO:0000313|EMBL:KEQ29647.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_2867_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6941..8797)
DNA (1857bp) protein (619aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003632B90 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEV97660.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_2867_10
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(8784..9176)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035EE977
Uncharacterized protein {ECO:0000313|EMBL:AKD04226.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
gtra family protein
scnpilot_solids2_trim150_scaffold_2867_11
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(9178..9624)
DNA (447bp) protein (149aa)
phosphatidylglycerophosphatase A; K01095 phosphatidylglycerophosphatase A [EC:3.1.3.27]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037045E9
Phosphatidylglycerophosphatase {ECO:0000313|EMBL:AKD56828.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
scnpilot_solids2_trim150_scaffold_2867_12
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(9624..10952)
DNA (1329bp) protein (443aa)
inositol-3-phosphate synthase; K01858 myo-inositol-1-phosphate synthase [EC:5.5.1.4] rbh
inositol-3-phosphate synthase n=1 Tax=Segetibacter koreensis RepID=UPI0003612042 rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_2867_13
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11010..11993)
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003691474 rbh
NAD-dependent epimerase/dehydratase rbh
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:AEV97664.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_2867_14
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11990..13078)
DNA (1089bp) protein (363aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037633FE rbh
Uncharacterized protein {ECO:0000313|EMBL:EOR92861.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_2867_15
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(13108..14319)
DNA (1212bp) protein (404aa)
glycine C-acetyltransferase (EC:2.3.1.29) rbh
2-amino-3-ketobutyrate CoA ligase n=1 Tax=Segetibacter koreensis RepID=UPI00035E72B8 rbh
2-amino-3-ketobutyrate CoA ligase {ECO:0000313|EMBL:AKD04222.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
scnpilot_solids2_trim150_scaffold_2867_16
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14393..14833)
DNA (441bp) protein (147aa)
Regulatory protein MarR n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EJD5_RUNSL
regulatory protein MarR
Regulatory protein MarR {ECO:0000313|EMBL:AEI50429.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
scnpilot_solids2_trim150_scaffold_2867_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15172..15846)
DNA (675bp) protein (225aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPP6_NIAKG
peptidase S8 and S53 subtilisin kexin sedolisin
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:AEV98879.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_2867_18
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15821..18937)
DNA (3117bp) protein (1039aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036B7CFF rbh
peptidase M36 fungalysin rbh
Peptidase M36 fungalysin {ECO:0000313|EMBL:AEV98072.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_2867_19
unknown

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comp(18961..19062)
DNA (102bp) protein (34aa)

This feature has no annotations

Displaying 19 items

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