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scnpilot_solids2_trim150_scaffold_4123

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_4123_1
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(3..272)
DNA (270bp) protein (90aa)
Copper homeostasis protein CutC n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2ET34_EMTOG
Copper homeostasis protein cutC
Copper homeostasis protein CutC {ECO:0000256|HAMAP-Rule:MF_00795}; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
scnpilot_solids2_trim150_scaffold_4123_2
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(444..1466)
DNA (1023bp) protein (341aa)
N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase; K01444 N4-(beta-N-acetylglucosaminyl)-L-asparaginase [EC:3.5.1.26]
N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase {ECO:0000313|EMBL:AEE53824.1}; EC=3.5.1.26 {ECO:0000313|EMBL:AEE53824.1};; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L1C7_HALH1
scnpilot_solids2_trim150_scaffold_4123_3
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1541..4519
DNA (2979bp) protein (993aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
DNA polymerase III subunit alpha; K02337 DNA polymerase III subunit alpha [EC:2.7.7.7]
DNA polymerase III, alpha subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL27_NIAKG
scnpilot_solids2_trim150_scaffold_4123_4
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(4509..5639)
DNA (1131bp) protein (377aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003809A7A
Multidrug transporter {ECO:0000313|EMBL:KEQ31697.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
Bcr/CflA subfamily drug resistance transporter; K07552 MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein
scnpilot_solids2_trim150_scaffold_4123_5
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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5717..7036
DNA (1320bp) protein (440aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035CE9C7
Helicase {ECO:0000313|EMBL:KIC96517.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
DEAD/DEAH box helicase
scnpilot_solids2_trim150_scaffold_4123_6
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(7067..7741)
DNA (675bp) protein (225aa)
polysaccharide deacetylase n=1 Tax=Flavobacterium sp. ACAM 123 RepID=UPI0002FB891F
Polysaccharide deacetylase {ECO:0000313|EMBL:KIA87006.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
polysaccharide deacetylase
scnpilot_solids2_trim150_scaffold_4123_7
BJP_08E140C01_Flavobacteriales_35_8, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(7756..8784)
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036B74B6
hypothetical protein
Tax=BJP_08E140C01_Flavobacteriales_35_8
scnpilot_solids2_trim150_scaffold_4123_8
unknown

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9069..9176
DNA (108bp) protein (36aa)

This feature has no annotations

Displaying 8 items

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