ggKbase home page

scnpilot_solids2_trim150_scaffold_7390

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_7390_1
Odoribacter sp. CAG:788, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2..358)
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000365EBF1
Uncharacterized protein {ECO:0000313|EMBL:CCZ09899.1}; TaxID=1262909 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter sp. CAG:788.;"
heptosyltransferase involved in lipopolysaccharide core biosynthesis
scnpilot_solids2_trim150_scaffold_7390_2
Galbibacter marinus, Galbibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(355..960)
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00038124B9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKF56752.1}; TaxID=555500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Galbibacter.;" source="Galbibacter marinus.;"
scnpilot_solids2_trim150_scaffold_7390_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(1024..1704)
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037B017D rbh
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_7390_4
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1773..2501)
DNA (729bp) protein (243aa)
sodium:dicarboxylate symporter n=1 Tax=Niabella aurantiaca RepID=UPI0003814CB4
Sodium:dicarboxylate symporter {ECO:0000313|EMBL:AHF14623.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
gltP; glutamate/aspartate:proton symporter
scnpilot_solids2_trim150_scaffold_7390_5
unknown

Not on your lists

2639..3007
DNA (369bp) protein (123aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_7390_6
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3215..4879
DNA (1665bp) protein (555aa)
Amino acid/polyamine/organocation transporter, APC superfamily n=1 Tax=Niabella soli DSM 19437 RepID=H1NKP2_9SPHI
Amino acid permease {ECO:0000313|EMBL:AHF14622.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
amino acid permease; K03294 basic amino acid/polyamine antiporter, APA family
scnpilot_solids2_trim150_scaffold_7390_7
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5020..5688
DNA (669bp) protein (223aa)
exodeoxyribonuclease III; K01142 exodeoxyribonuclease III [EC:3.1.11.2]
Exodeoxyribonuclease III Xth {ECO:0000313|EMBL:ADZ81038.1}; EC=3.1.11.2 {ECO:0000313|EMBL:ADZ81038.1};; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
Exodeoxyribonuclease III Xth n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C676_SPHS2
Displaying 7 items

View Taxonomy