ggKbase home page

scnpilot_solids2_trim150_scaffold_1326

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1326_1
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3..1838
DNA (1836bp) protein (612aa)
hypothetical protein n=1 Tax=Flavobacterium sp. ACAM 123 RepID=UPI000304F9D3 rbh
TonB-dependent receptor plug {ECO:0000313|EMBL:EHQ28596.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
TonB-dependent receptor plug; K02014 iron complex outermembrane recepter protein
scnpilot_solids2_trim150_scaffold_1326_2
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2176..4305
DNA (2130bp) protein (710aa)
oligopeptidase B; K01354 oligopeptidase B [EC:3.4.21.83]
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J355_9PORP
Tax=GWB2_Bacteroidetes_41_8_curated
scnpilot_solids2_trim150_scaffold_1326_3
unknown

Not on your lists

4392..4658
DNA (267bp) protein (89aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1326_4
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4648..4920
DNA (273bp) protein (91aa)
Putative uncharacterized protein id=4086380 bin=GWF2_Bacteroidetes_38_335 species=Porphyromonas uenonis genus=Porphyromonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
hypothetical protein
Tax=GWF2_Bacteroidetes_38_335_curated
scnpilot_solids2_trim150_scaffold_1326_5
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4874..5281
DNA (408bp) protein (136aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J1Y1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK00237.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1326_6
Algoriphagus machipongonensis, Algoriphagus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(5372..7594)
DNA (2223bp) protein (741aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=388413 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Algoriphagus.;" source="Algoriphagus machipongonensis.;"
Sensor histidine kinase n=1 Tax=Algoriphagus machipongonensis RepID=A3HV38_9BACT rbh
ATP-binding domain-containing protein rbh
scnpilot_solids2_trim150_scaffold_1326_7
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(7612..12645)
DNA (5034bp) protein (1678aa)
Subtilase family protease n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8QZ93_OWEHD rbh
subtilase family protease rbh
Tax=BJP_IG2103_Bacteroidetes_41_9
scnpilot_solids2_trim150_scaffold_1326_8
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(13380..14684)
DNA (1305bp) protein (435aa)
Mandelate racemase/muconate lactonizing protein n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BBC8_ZUNPS rbh
mandelate racemase/muconate lactonizing protein rbh
Tax=GWC2_Ignavibacteria_rel_36_12_curated
scnpilot_solids2_trim150_scaffold_1326_9
unknown

Not on your lists

14757..14861
DNA (105bp) protein (35aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1326_10
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15046..15828
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KVU3_SOLCM
dehydrogenase
Uncharacterized protein {ECO:0000313|EMBL:AFD06716.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_solids2_trim150_scaffold_1326_11
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15849..16613
DNA (765bp) protein (255aa)
short-chain dehydrogenase n=1 Tax=Niabella aurantiaca RepID=UPI000372C879
Short-chain dehydrogenase {ECO:0000313|EMBL:KIC64053.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
3-oxoacyl-(acyl-carrier-protein) reductase
scnpilot_solids2_trim150_scaffold_1326_12
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16649..17002
DNA (354bp) protein (118aa)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase (EC:4.1.1.68)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037CC12B
Uncharacterized protein {ECO:0000313|EMBL:GAO44546.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
scnpilot_solids2_trim150_scaffold_1326_13
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17041..17280
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037CC12B
5-carboxymethyl-2-hydroxymuconate delta-isomerase
Ureidoglycolate lyase {ECO:0000313|EMBL:KIC90008.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
scnpilot_solids2_trim150_scaffold_1326_14
Prevotella sp. CAG:5226, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17542..18615
DNA (1074bp) protein (358aa)
Aspartate--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088413}; EC=6.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088403};; Asparagine synthetase A {ECO:0000256|HAMAP-Rule:MF_00555}; TaxID=1262930 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:5226.;"
asnA; aspartate--ammonia ligase (EC:6.3.1.1); K01914 aspartate--ammonia ligase [EC:6.3.1.1] rbh
Aspartate--ammonia ligase n=1 Tax=Prevotella sp. CAG:5226 RepID=R6AWG8_9BACT rbh
scnpilot_solids2_trim150_scaffold_1326_15
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

18707..19060
DNA (354bp) protein (118aa)
hypothetical protein; K03534 L-rhamnose mutarotase [EC:5.1.3.-]
Uncharacterized protein n=3 Tax=Elizabethkingia RepID=L8K454_9FLAO
L-fucose mutarotase {ECO:0000313|EMBL:AKD02285.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
scnpilot_solids2_trim150_scaffold_1326_16
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

19064..19894
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000365096F rbh
Amidohydrolase {ECO:0000313|EMBL:AKD02278.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
amidohydrolase 2; K07046 rbh
scnpilot_solids2_trim150_scaffold_1326_17
Zunongwangia profunda, Zunongwangia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19926..20492)
DNA (567bp) protein (189aa)
Acyl-CoA thioester hydrolase n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BAL5_ZUNPS
acyl-CoA thioester hydrolase
Acyl-CoA thioester hydrolase {ECO:0000313|EMBL:ADF52378.1}; TaxID=655815 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zunongwangia.;" source="Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87).;"
scnpilot_solids2_trim150_scaffold_1326_18
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(20737..23046)
DNA (2310bp) protein (770aa)
beta-N-acetylhexosaminidase (EC:3.2.1.52)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI00037B322B
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
scnpilot_solids2_trim150_scaffold_1326_19
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23169..25298)
DNA (2130bp) protein (710aa)
Alpha-N-acetylglucosaminidase, Alpha-L-fucosidase n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CHS4_ELIME rbh
Alpha-N-acetylglucosaminidase, Alpha-L-fucosidase {ECO:0000313|EMBL:KFC58712.1}; TaxID=1492737 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
Alpha-N-acetylglucosaminidase, Alpha-L-fucosidase rbh
scnpilot_solids2_trim150_scaffold_1326_20
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(25326..27764)
DNA (2439bp) protein (813aa)
alpha-l-fucosidase (EC:3.2.1.51) rbh
Alpha-L-fucosidase {ECO:0000313|EMBL:ADQ18902.1}; EC=3.2.1.51 {ECO:0000313|EMBL:ADQ18902.1};; Flags: Precursor;; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;"
Alpha-L-fucosidase n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RVZ2_LEAB4 rbh
scnpilot_solids2_trim150_scaffold_1326_21
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28086..28787)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KN05_SOLCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD09084.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
scnpilot_solids2_trim150_scaffold_1326_22
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

29103..29996
DNA (894bp) protein (298aa)
MscS Mechanosensitive ion channel n=1 Tax=Niabella soli DSM 19437 RepID=H1NKW8_9SPHI
Mechanosensitive ion channel protein {ECO:0000313|EMBL:AHF14385.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
small-conductance mechanosensitive channel; K03442 small conductance mechanosensitive channel
scnpilot_solids2_trim150_scaffold_1326_23
unknown

Not on your lists

comp(29954..30061)
DNA (108bp) protein (36aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1326_24
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30049..31221)
DNA (1173bp) protein (391aa)
Exo-alpha-sialidase; K01186 sialidase-1 [EC:3.2.1.18]
Exo-alpha-sialidase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W5L7_DYAFD
Exo-alpha-sialidase {ECO:0000313|EMBL:KIC91875.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
scnpilot_solids2_trim150_scaffold_1326_25
Winogradskyella psychrotolerans, Winogradskyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31266..31616)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Winogradskyella psychrotolerans RS-3 RepID=S7X7V4_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EPR72118.1}; TaxID=641526 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Winogradskyella.;" source="Winogradskyella psychrotolerans RS-3.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1326_26
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(31716..32315)
DNA (600bp) protein (200aa)
Methyltransferase type 12 n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8ERF5_RUNSL
type 12 methyltransferase
Methyltransferase type 12 {ECO:0000313|EMBL:AEI52196.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
scnpilot_solids2_trim150_scaffold_1326_27
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

32614..33639
DNA (1026bp) protein (342aa)
Putative aminopeptidase n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GST4_9BACT
Putative aminopeptidase {ECO:0000313|EMBL:CCH56963.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
peptidase M1 membrane alanine aminopeptidase
Displaying 27 items

View Taxonomy