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scnpilot_solids2_trim150_scaffold_1499

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids2_trim150_scaffold_1499_1
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2..1306)
DNA (1305bp) protein (435aa)
TonB-dependent siderophore receptor n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAP2_CHIPD
TonB-dependent siderophore receptor; K02014 iron complex outermembrane recepter protein
TonB-dependent siderophore receptor {ECO:0000313|EMBL:ACU63006.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_1499_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1682..3223)
DNA (1542bp) protein (514aa)
signal peptidase I; K03100 signal peptidase I [EC:3.4.21.89]
Signal peptidase I n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T6W7_NIAKG
Signal peptidase I {ECO:0000313|EMBL:AEV97970.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_1499_3
Leptospira interrogans, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(3316..3951)
DNA (636bp) protein (212aa)
Uncharacterized protein n=30 Tax=Leptospira interrogans RepID=J7SQZ7_LEPIR
hypothetical protein
Alpha/beta hydrolase family protein {ECO:0000313|EMBL:AKH79262.1}; TaxID=338215 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira interrogans serovar Bratislava.;"
scnpilot_solids2_trim150_scaffold_1499_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3966..5129)
DNA (1164bp) protein (388aa)
Putative two component, sigma54 specific, transcriptional regulator n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T6W5_NIAKG
putative two component sigma-54 specific transcriptional regulator
Putative two component, sigma54 specific, transcriptional regulator {ECO:0000313|EMBL:AEV97968.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_1499_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5159..6097)
DNA (939bp) protein (313aa)
Bacterial peptide chain release factor 2 (BRF-2) n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJ19_NIAKG
peptide chain release factor 2 (bRF-2); K02836 peptide chain release factor 2
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_1499_6
unknown

Not on your lists

6275..6481
DNA (207bp) protein (69aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1499_7
Joostella marina, Joostella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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6559..8544
DNA (1986bp) protein (662aa)
High-affinity Fe2+/Pb2+ permease n=1 Tax=Joostella marina DSM 19592 RepID=I3C6U1_9FLAO rbh
High-affinity Fe2+/Pb2+ permease {ECO:0000313|EMBL:EIJ39334.1}; Flags: Precursor;; TaxID=926559 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Joostella.;" source="Joostella marina DSM 19592.;"
high-affinity Fe2+/Pb2+ permease rbh
scnpilot_solids2_trim150_scaffold_1499_8
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8673..10118
DNA (1446bp) protein (482aa)
glycoside hydrolase; K01201 glucosylceramidase [EC:3.2.1.45] rbh
Glycoside hydrolase family 30 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PNN6_CHIPD rbh
Glycoside hydrolase family 30 {ECO:0000313|EMBL:ACU64136.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_solids2_trim150_scaffold_1499_9
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10129..11493)
DNA (1365bp) protein (455aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TKC8_NIAKG
Putative two-component histidine kinase {ECO:0000313|EMBL:GAO44388.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
integral membrane sensor signal transduction histidine kinase
scnpilot_solids2_trim150_scaffold_1499_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11497..12852)
DNA (1356bp) protein (452aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TKC7_NIAKG
two component, sigma54 specific, transcriptional regulator, Fis family
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:AEV97583.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
scnpilot_solids2_trim150_scaffold_1499_11
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13183..14439
DNA (1257bp) protein (419aa)
transporter n=1 Tax=Segetibacter koreensis RepID=UPI000381D427 rbh
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EHQ26289.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
RND family efflux transporter MFP subunit; K02005 HlyD family secretion protein rbh
scnpilot_solids2_trim150_scaffold_1499_12
unknown

Not on your lists

14442..14591
DNA (150bp) protein (50aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1499_13
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14619..15296
DNA (678bp) protein (226aa)
Phosphonate-transporting ATPase n=1 Tax=Niabella soli DSM 19437 RepID=H1NPC6_9SPHI
Phosphonate ABC transporter ATP-binding protein {ECO:0000313|EMBL:AHF15043.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
phosphonate-transporting ATPase; K02003 putative ABC transport system ATP-binding protein
scnpilot_solids2_trim150_scaffold_1499_14
Flavobacterium sp. 316, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15421..15783
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Thermophagus xiamenensis RepID=UPI000255D641
Uncharacterized protein {ECO:0000313|EMBL:KIX20143.1}; TaxID=1603293 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. 316.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1499_15
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

15840..18200
DNA (2361bp) protein (787aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000372CBE2 rbh
Uncharacterized protein {ECO:0000313|EMBL:AHM62856.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_1499_16
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18306..18665)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C9A6_SPHS2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ78433.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
scnpilot_solids2_trim150_scaffold_1499_17
unknown

Not on your lists

comp(18709..18936)
DNA (228bp) protein (76aa)

This feature has no annotations

scnpilot_solids2_trim150_scaffold_1499_18
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19031..21409
DNA (2379bp) protein (793aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00038097D1 rbh
Uncharacterized protein {ECO:0000313|EMBL:AHF15039.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein rbh
scnpilot_solids2_trim150_scaffold_1499_19
Synechocystis sp. PCC 6714, Synechocystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(21515..21754)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CAE3_SPHS2
Uncharacterized protein {ECO:0000313|EMBL:AIE76132.1}; TaxID=1147 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechocystis.;" source="Synechocystis sp. (strain PCC 6714) (Aphanocapsa sp. (strain PCC; 6714)).;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1499_20
Gillisia limnaea, Gillisia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21945..22166)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Gillisia limnaea DSM 15749 RepID=H2BXP1_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EHQ03165.1}; TaxID=865937 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Gillisia.;" source="Gillisia limnaea DSM 15749.;"
scnpilot_solids2_trim150_scaffold_1499_21
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

22261..24654
DNA (2394bp) protein (798aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI00036E2616
Uncharacterized protein {ECO:0000313|EMBL:CCH52428.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
antimicrobial peptide ABC transporter permease
scnpilot_solids2_trim150_scaffold_1499_22
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(24715..25128)
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI00036DAC0F
DNA-binding protein {ECO:0000313|EMBL:KIJ85374.1}; TaxID=1233231 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;"
PIN domain-containing protein
scnpilot_solids2_trim150_scaffold_1499_23
Gillisia limnaea, Gillisia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25118..25345)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Gillisia limnaea DSM 15749 RepID=H2BXP1_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EHQ03165.1}; TaxID=865937 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Gillisia.;" source="Gillisia limnaea DSM 15749.;"
hypothetical protein
scnpilot_solids2_trim150_scaffold_1499_24
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25438..25527
DNA (90bp) protein (30aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EAJ4_RUNSL
Cell division protein FtsX {ECO:0000313|EMBL:KIC93641.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein; K02004 putative ABC transport system permease protein
scnpilot_solids2_trim150_scaffold_1499_25
unknown

Not on your lists

25536..27158
DNA (1623bp) protein (541aa)

This feature has no annotations

Displaying 25 items

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